>Y33A_METJA (P81306) Hypothetical protein MJ0332.1|
          Length = 132

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 134 YLNLLVAHLNFRMETLYYFSVMFDVLRVPVLMHNVLPFVVVY 9
           YL  L   +   +     FS++F +L +PVL    +P+V+ Y
Sbjct: 27  YLKKLYQSMALTLAVFGIFSLLFFLLYIPVLSKKAVPYVINY 68

>SYM_MANSM (Q65S22) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 686

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 137 GYLNLLVAHLNFRMETLYYFSVMFDVLRVPVLMHNVLPFVVVYS 6
           GYL  ++  L  R E      + +D L  P+L H + PF  ++S
Sbjct: 488 GYLKPVLPKLAERSEAFLQAELTWDNLAQPLLNHGIAPFKALFS 531

>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent|
           helicase IGHMBP2) (Immunoglobulin mu-binding protein 2)
           (SMUBP-2) (Glial factor 1) (GF-1)
          Length = 993

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 SSQAWKEDGKNLSQQAGRARRISGQEASAPPASGR 283
           S  A K  G   S + G  R+  GQEA+AP   GR
Sbjct: 660 SHAATKPQGPATSTRTGSQRQEGGQEAAAPARQGR 694

>PO23_POPJA (Q05118) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 606

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 279 PLAGGAEASWPEMRRALPACWLRFLPSSFQAWELHTQLK 163
           PL  GA   WP  R  +P C +  +P++ +A  +HT LK
Sbjct: 543 PLLLGARGIWP--RANVPTCNILSIPTTLRASCVHTCLK 579

>GLUB7_ORYSA (Q52PJ1) Glutelin type-B 7 precursor [Contains: Glutelin type-B 7|
           acidic chain; Glutelin type-B 7 basic chain]
          Length = 495

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 168 IVYEAPRLGRRTAK-ISASRQEEHGAFQARKLQRLQP 275
           +V  A R+ R  A+ I  +R EEHGAF  R  Q+  P
Sbjct: 447 VVANAYRISREQARSIKNNRGEEHGAFTPRFQQQYYP 483

>GLUB2_ORYSA (Q02897) Glutelin type-B 2 precursor [Contains: Glutelin type-B 2|
           acidic chain; Glutelin type-B 2 basic chain]
          Length = 495

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 168 IVYEAPRLGRRTAK-ISASRQEEHGAFQARKLQRLQP 275
           +V  A R+ R  A+ I  +R EEHGAF  R  Q+  P
Sbjct: 447 VVANAYRISREQARSIKNNRGEEHGAFTPRFQQQYYP 483


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,506,248
Number of Sequences: 219361
Number of extensions: 876366
Number of successful extensions: 2370
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2370
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)