Clone Name | rbastl14f11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HAM11_BACHD (Q9KDQ1) HAM1 protein homolog 1 | 28 | 7.9 |
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>HAM11_BACHD (Q9KDQ1) HAM1 protein homolog 1| Length = 193 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 6/43 (13%) Frame = -3 Query: 227 GEMSRWLGYRPDKDGEGF------CSVDLYYHPINLVQCRSLS 117 G++ W+ Y P KDG+G+ C L I + +C S Sbjct: 134 GKIEGWITYGPVKDGQGYGGIFILCDEQLLAENIQMARCNHRS 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,531,333 Number of Sequences: 219361 Number of extensions: 539529 Number of successful extensions: 949 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 949 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)