Clone Name | rbastl14f09 |
---|---|
Clone Library Name | barley_pub |
>gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagagg 204 |||||||||||||| |||||| |||||||| ||||||||||||| Sbjct: 734 gttcaaattgaactgcaaaaacgtcttatatttagaaacagagg 691 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagaggg 205 |||||| |||||||||||||| |||||||| |||| ||||||||| Sbjct: 722 gttcaatttgaactacaaaaacgtcttatatttaggaacagaggg 766
>gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum clone 453 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagagg 204 |||||||||||||| |||||| |||||||| ||||||||||||| Sbjct: 734 gttcaaattgaactgcaaaaacgtcttatatttagaaacagagg 691 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagaggg 205 |||||| |||||||||||||| |||||||| |||| ||||||||| Sbjct: 722 gttcaatttgaactacaaaaacgtcttatatttaggaacagaggg 766
>gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clone 465 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1836 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagaggg 205 |||||| |||||||||||||| |||||||| |||| ||||||||| Sbjct: 722 gttcaatttgaactacaaaaacgtcttatatttaggaacagaggg 766 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 161 gttcaaattgaactacaaaaatgtcttata 190 |||||||||||||| |||||| |||||||| Sbjct: 734 gttcaaattgaactgcaaaaacgtcttata 705
>gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clone 437 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1812 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagaggg 205 |||||||||||||| |||||| |||||||| |||| ||||||||| Sbjct: 722 gttcaaattgaactgcaaaaacgtcttatatttaggaacagaggg 766 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 161 gttcaaattgaactacaaaaatgtcttatagttagaaacagagg 204 |||||| ||||||| |||||| |||||||| ||||||||||||| Sbjct: 734 gttcaatttgaactgcaaaaacgtcttatatttagaaacagagg 691
>gb|AF306826.1|AF306826 Triticum timopheevii subsp. armeniacum clone 506 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1797 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 169 tgaactacaaaaatgtcttatagttagaaacagagg 204 ||||||||||||| |||||||| |||| |||||||| Sbjct: 734 tgaactacaaaaacgtcttatatttaggaacagagg 699
>gb|AF306825.1|AF306825 Triticum timopheevii subsp. timopheevii clone 513 cytosolic acetyl-CoA carboxylase gene, partial cds Length = 1796 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 169 tgaactacaaaaatgtcttatagttagaaacagagg 204 ||||||||||||| |||||||| |||| |||||||| Sbjct: 734 tgaactacaaaaacgtcttatatttaggaacagagg 699
>gb|AC127898.6| Homo sapiens 12 BAC RP11-373K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159557 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tacaaaaatgtcttatagtta 194 ||||||||||||||||||||| Sbjct: 82133 tacaaaaatgtcttatagtta 82113
>gb|AC079386.23| Homo sapiens 12 BAC RP11-12K13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154172 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tacaaaaatgtcttatagtta 194 ||||||||||||||||||||| Sbjct: 1141 tacaaaaatgtcttatagtta 1121
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cttatagttagaaacagagg 204 |||||||||||||||||||| Sbjct: 40147 cttatagttagaaacagagg 40128
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcaatgtataaagacgcttt 156 |||||||||||||||||||| Sbjct: 393663 gcaatgtataaagacgcttt 393682
>gb|AC121892.3| Mus musculus BAC clone RP24-155I11 from chromosome 1, complete sequence Length = 152888 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cttatagttagaaacagagg 204 |||||||||||||||||||| Sbjct: 135247 cttatagttagaaacagagg 135228
>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence Length = 198453 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaaatgtcttatagttagaa 197 |||||||||||||||||||| Sbjct: 79176 aaaatgtcttatagttagaa 79157
>gb|AC161149.6| Mus musculus BAC clone RP23-350B16 from chromosome 1, complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 attgtcacatagacaaattt 49 |||||||||||||||||||| Sbjct: 8228 attgtcacatagacaaattt 8209
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 aaaatgtcttatagttagaaacagaggg 205 ||||| ||||||| |||||||||||||| Sbjct: 59547 aaaatatcttatatttagaaacagaggg 59520
>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence Length = 177303 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaatgtcttatagttagaa 197 |||||||||||||||||||| Sbjct: 20986 aaaatgtcttatagttagaa 21005
>emb|BX004850.11| Zebrafish DNA sequence from clone CH211-51M24 in linkage group 19, complete sequence Length = 121375 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 acaaaaatgtcttatagttagaaa 198 ||||||||||||||||||| |||| Sbjct: 102776 acaaaaatgtcttatagtttgaaa 102799
>gb|AC134607.5| Mus musculus BAC clone RP23-65J2 from chromosome 9, complete sequence Length = 230480 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaaatgtcttatagttagaa 197 |||||||||||||||||||| Sbjct: 214212 aaaatgtcttatagttagaa 214193
>gb|AC133168.3| Mus musculus BAC clone RP24-217I2 from 1, complete sequence Length = 169783 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 attgtcacatagacaaattt 49 |||||||||||||||||||| Sbjct: 85190 attgtcacatagacaaattt 85171
>emb|Z70781.1|CEF57A8 Caenorhabditis elegans Cosmid F57A8, complete sequence Length = 30894 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 tataaagacgctttttgtgttcaa 166 |||| ||||||||||||||||||| Sbjct: 10279 tatatagacgctttttgtgttcaa 10256
>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence Length = 207088 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaatgtcttatagttagaa 197 |||||||||||||||||||| Sbjct: 180459 aaaatgtcttatagttagaa 180478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,399,674 Number of Sequences: 3902068 Number of extensions: 2399674 Number of successful extensions: 41928 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41896 Number of HSP's gapped (non-prelim): 32 length of query: 286 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 264 effective length of database: 17,147,199,772 effective search space: 4526860739808 effective search space used: 4526860739808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)