>gb|BT019017.1| Zea mays clone Contig515.F mRNA sequence
          Length = 1513

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 324  aatcacttgtagctaagcagaactgagttgatgacatgcatga 366
            ||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 1147 aatcacttgtagctaagcagaaccgagttaattacatgcatga 1105

>gb|AY109484.1| Zea mays CL3541_1 mRNA sequence
          Length = 1061

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 324 aatcacttgtagctaagcagaactgagttgatgacatgcatga 366
           ||||||||||||||||||||||||||||| ||  |||||||||
Sbjct: 183 aatcacttgtagctaagcagaactgagttaattccatgcatga 225

>ref|XM_467537.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4486

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 321  tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
            |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 4127 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 4082

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 321      tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
                |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 30034850 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 30034895

>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 321   tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
             |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 14447 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 14492

>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654B04
          Length = 156907

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                            
Query: 321    tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
              |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 135126 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 135171

>dbj|AK122035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112L23, full
            insert sequence
          Length = 4485

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 321  tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
            |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 4126 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 4081

>dbj|AK061221.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F03, full
            insert sequence
          Length = 1316

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 321  tagaatcacttgtagctaagcagaactgagttgatgacatgcatga 366
            |||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 1108 tagaatcacttgtagctaagcagaacagaattaattacatgcatga 1063

>emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 252    tttcaaaattttctctctata 272
              |||||||||||||||||||||
Sbjct: 244906 tttcaaaattttctctctata 244926

>emb|AL772408.4| Mouse DNA sequence from clone RP23-339B20 on chromosome 2, complete
              sequence
          Length = 208703

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    ttctagttttcccttgctttt 254
              |||||||||||||||||||||
Sbjct: 136503 ttctagttttcccttgctttt 136523

>gb|AC099468.9| Rattus norvegicus 1 BAC CH230-37P5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 212177

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    tgcttttcaaaattttctct 267
              ||||||||||||||||||||
Sbjct: 161572 tgcttttcaaaattttctct 161591

>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3,
              complete sequence
          Length = 209530

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      catcaatcatattttgggtg 26
              ||||||||||||||||||||
Sbjct: 207609 catcaatcatattttgggtg 207628

>emb|AL590364.5| Human DNA sequence from clone RP11-342D14 on chromosome X Contains the
             3' end of a novel gene, complete sequence
          Length = 65644

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     catcaatcatattttgggtg 26
             ||||||||||||||||||||
Sbjct: 57416 catcaatcatattttgggtg 57435

>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the
              RAB18 gene for RAB18, member RAS oncogene family and a CpG
              island, complete sequence
          Length = 168217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    ttttcaaaattttctctcta 270
              ||||||||||||||||||||
Sbjct: 151009 ttttcaaaattttctctcta 150990

>emb|AL135918.6| Human DNA sequence from clone RP1-89K8 on chromosome 6, complete
             sequence
          Length = 110716

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   tttttcttggtgacagtttt 225
             ||||||||||||||||||||
Sbjct: 58817 tttttcttggtgacagtttt 58836

>emb|BX664015.1| Serratia marcescens plasmid R478
          Length = 274762

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    aactgagttgatgacatgcatgag 367
              |||||||||||||||||| |||||
Sbjct: 192053 aactgagttgatgacatgaatgag 192030

>emb|AL645683.7| Mouse DNA sequence from clone RP23-374M7 on chromosome 13 Contains the
             V1ri9 gene for vomeronasal 1 receptor I9 and the gene for
             a novel vomeronasal 1 receptor I (V1ri) family member,
             complete sequence
          Length = 77611

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   aaagaaagaatagaccatca 293
             ||||||||||||||||||||
Sbjct: 72317 aaagaaagaatagaccatca 72298

>gb|AC119409.25| Medicago truncatula clone mth2-10i9, complete sequence
          Length = 127954

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   tgagttgatgacatgcatga 366
             ||||||||||||||||||||
Sbjct: 76929 tgagttgatgacatgcatga 76910

>dbj|AK057337.1| Homo sapiens cDNA FLJ32775 fis, clone TESTI2002012
          Length = 2688

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ttttcaaaattttctctctataca 274
           ||||| ||||||||||||||||||
Sbjct: 759 ttttccaaattttctctctataca 736

>ref|XM_944060.1| PREDICTED: Homo sapiens hypothetical protein LOC145820 (LOC145820),
           mRNA
          Length = 2688

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ttttcaaaattttctctctataca 274
           ||||| ||||||||||||||||||
Sbjct: 753 ttttccaaattttctctctataca 730

>ref|XM_378546.2| PREDICTED: Homo sapiens hypothetical protein LOC145820 (LOC145820),
           mRNA
          Length = 2688

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ttttcaaaattttctctctataca 274
           ||||| ||||||||||||||||||
Sbjct: 753 ttttccaaattttctctctataca 730

>gb|AC008958.7| Homo sapiens chromosome 5 clone CTD-2353N24, complete sequence
          Length = 109526

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   cttttcaaaattttctctct 269
             ||||||||||||||||||||
Sbjct: 94246 cttttcaaaattttctctct 94265

>emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, complete sequence
          Length = 84809

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   ttttctctctatacaaagaaagaa 283
             |||||||| |||||||||||||||
Sbjct: 51042 ttttctctttatacaaagaaagaa 51019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,206,836
Number of Sequences: 3902068
Number of extensions: 4206836
Number of successful extensions: 87996
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87913
Number of HSP's gapped (non-prelim): 83
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)