Clone Name | rbastl14f07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, complete sequence Length = 3065 Score = 141 bits (71), Expect = 2e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 277 cacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatg 336 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 2754 cacgatcttcacttgtcctttttctccctggcaatgaggtccatcacagctcgcttgatg 2695 Query: 337 cttcctccattcttggcaagcagctccttgt 367 ||||| |||||||| |||||||||||||||| Sbjct: 2694 cttcccccattcttcgcaagcagctccttgt 2664
>gb|AY108354.1| Zea mays PCO112404 mRNA sequence Length = 2108 Score = 133 bits (67), Expect = 4e-28 Identities = 85/91 (93%) Strand = Plus / Minus Query: 277 cacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatg 336 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1737 cacgatcttcacttgtccttcttctccctggcaatgagctccatcacagctcgcttgatg 1678 Query: 337 cttcctccattcttggcaagcagctccttgt 367 ||||| ||||||| |||||||||||||||| Sbjct: 1677 cttccctcattcttcgcaagcagctccttgt 1647
>ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2804 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2745 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 2744 ttgatgcttcctccgttcttctcgagcatctccttgt 2708
>ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.28-1 mRNA Length = 3152 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2844 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2785 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 2784 ttgatgcttcctccgttcttctcgagcatctccttgt 2748
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 23001565 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 23001624 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 23001625 ttgatgcttcctccgttcttctcgagcatctccttgt 23001661
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 25962 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 26021 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 26022 ttgatgcttcctccgttcttctcgagcatctccttgt 26058
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 121367 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 121426 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 121427 ttgatgcttcctccgttcttctcgagcatctccttgt 121463
>dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E12, full insert sequence Length = 3112 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2804 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2745 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 2744 ttgatgcttcctccgttcttctcgagcatctccttgt 2708
>dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141P19, full insert sequence Length = 3149 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2841 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2782 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 2781 ttgatgcttcctccgttcttctcgagcatctccttgt 2745
>dbj|AK071429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L03, full insert sequence Length = 2010 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 1702 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 1643 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 1642 ttgatgcttcctccgttcttctcgagcatctccttgt 1606
>dbj|AK060817.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-A04, full insert sequence Length = 1619 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 271 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 330 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 1306 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 1247 Query: 331 ttgatgcttcctccattcttggcaagcagctccttgt 367 |||||||||||||| ||||| | |||| |||||||| Sbjct: 1246 ttgatgcttcctccgttcttctcgagcatctccttgt 1210
>emb|AJ575228.1|OSA575228 Oryza sativa (japonica cultivar-group) partial mRNA for TA4 protein Length = 627 Score = 85.7 bits (43), Expect = 9e-14 Identities = 73/83 (87%) Strand = Plus / Minus Query: 285 tcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatgcttcctcc 344 ||||| ||| ||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 627 tcactggtctttcttctccctagcgatgaggtccatcacagcccgcttgatgcttcctcc 568 Query: 345 attcttggcaagcagctccttgt 367 ||||| | |||| |||||||| Sbjct: 567 gttcttctcgagcatctccttgt 545
>gb|BC033575.1| Mus musculus PRP39 pre-mRNA processing factor 39 homolog (yeast), mRNA (cDNA clone IMAGE:5323073) Length = 4960 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 tatttaggcatatataaatagatata 254 |||||| ||||||||||||||||||| Sbjct: 2526 tatttatgcatatataaatagatata 2501
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaatag 263 |||||||||||||||||||||| Sbjct: 123275 ataaatagatatagataaatag 123254
>emb|BX927402.13| Zebrafish DNA sequence from clone CH211-262G12 in linkage group 10, complete sequence Length = 155963 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaatag 263 ||||||||||||||||||||| |||| Sbjct: 117986 atatataaatagatatagatagatag 118011
>gb|AC034299.8| Homo sapiens chromosome 18, clone RP11-500P9, complete sequence Length = 130795 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 catatataaatagatatagataaata 262 |||||||| ||||||||||||||||| Sbjct: 75865 catatatatatagatatagataaata 75890
>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence Length = 173368 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaatag 263 ||||| |||||||||||||||||||| Sbjct: 172723 atataaaaatagatatagataaatag 172698
>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence Length = 144356 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaatag 263 ||||| |||||||||||||||||||| Sbjct: 132362 atataaaaatagatatagataaatag 132387
>gb|AC159621.2| Mus musculus BAC clone RP24-342I9 from chromosome 12, complete sequence Length = 178350 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 tatttaggcatatataaatagatata 254 |||||| ||||||||||||||||||| Sbjct: 110039 tatttatgcatatataaatagatata 110064
>dbj|AK034600.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430013F24 product:unclassifiable, full insert sequence Length = 2770 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 tatttaggcatatataaatagatata 254 |||||| ||||||||||||||||||| Sbjct: 909 tatttatgcatatataaatagatata 884
>emb|BX088538.25| Zebrafish DNA sequence from clone DKEY-69C19 in linkage group 4, complete sequence Length = 213700 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaatag 263 |||||||||||||||||||||| Sbjct: 210671 ataaatagatatagataaatag 210692
>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence Length = 165591 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaatag 263 ||||| |||||||||||||||||||| Sbjct: 143295 atataaaaatagatatagataaatag 143270
>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence Length = 166871 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaatag 263 |||||||||||||||||||||| Sbjct: 26907 ataaatagatatagataaatag 26886
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaatag 263 ||||||| |||||||||||||||||| Sbjct: 310245 atatatatatagatatagataaatag 310220
>emb|CR385053.17| Zebrafish DNA sequence from clone DKEY-273G18 in linkage group 20, complete sequence Length = 163087 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaatag 263 |||||||||||||||||||||| Sbjct: 45511 ataaatagatatagataaatag 45532
>gb|AC109255.10| Mus musculus chromosome 16, clone RP23-359P19, complete sequence Length = 206967 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaatag 263 |||||||||||||||||||||| Sbjct: 132657 ataaatagatatagataaatag 132636
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 191586 atatataaatagatatagata 191606
>gb|AC160456.8| Mus musculus chromosome 8, clone RP23-121F17, complete sequence Length = 221841 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 atataaatagatatagataaa 260 ||||||||||||||||||||| Sbjct: 21872 atataaatagatatagataaa 21892
>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence Length = 177269 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 25107 atatataaatagatatagata 25127
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 37517 ataaatagatatagataaata 37537
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 80277 atatataaatagatatagata 80257
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 73517 atatataaatagatatagata 73497
>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence Length = 188205 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaata 262 ||||||||||||||||| ||||||| Sbjct: 83172 atatataaatagatatatataaata 83196
>gb|AC109611.24| Mus musculus strain C57BL/6J clone rp23-342n8 map 5, complete sequence Length = 198992 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 taggcatatataaatagatatagat 257 |||||||||||| |||||||||||| Sbjct: 78342 taggcatatatagatagatatagat 78318
>gb|AC119206.13| Mus musculus chromosome 5, clone RP24-189M4, complete sequence Length = 168721 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 45542 atatataaatagatatagata 45562
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 140568 atatataaatagatatagata 140588
>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13, complete sequence Length = 219709 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaata 262 ||||||||||||||||| ||||||| Sbjct: 189457 atatataaatagatataaataaata 189481
>gb|AC018559.31| Mus musculus strain 129/Sv chromosome 6 clone ct7-596k8, complete sequence Length = 111775 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 5695 ataaatagatatagataaata 5675
>emb|BX323592.7| Zebrafish DNA sequence from clone CH211-213I23 in linkage group 14, complete sequence Length = 120180 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 92845 atatataaatagatatagata 92865
>gb|AC108934.4| Homo sapiens BAC clone RP11-469K17 from 4, complete sequence Length = 47217 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaata 262 ||||||||||| ||||||||||||| Sbjct: 42213 atatataaatatatatagataaata 42189 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaat 261 ||||||||||| |||||||||||| Sbjct: 42189 atatataaatatatatagataaat 42166
>gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, complete sequence Length = 221475 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 41124 ataaatagatatagataaata 41144
>emb|BX537155.6| Mouse DNA sequence from clone RP24-118I4 on chromosome 2, complete sequence Length = 52020 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 43696 atatataaatagatatagata 43716
>gb|AC160338.2| Mus musculus BAC clone RP23-261O3 from chromosome 9, complete sequence Length = 167569 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 135672 atatataaatagatatagata 135692
>gb|AC155720.7| Mus musculus 6 BAC RP24-151P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 210211 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 154817 ataaatagatatagataaata 154797
>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2, complete sequence Length = 185706 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 taaatagatatagataaatag 263 ||||||||||||||||||||| Sbjct: 792 taaatagatatagataaatag 812
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 70415 atatataaatagatatagata 70395
>emb|BX004974.21| Zebrafish DNA sequence from clone CH211-74A16 in linkage group 18, complete sequence Length = 186303 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaata 262 ||||||||||| ||||||||||||| Sbjct: 167926 atatataaataaatatagataaata 167902
>gb|AC009424.2|AC009424 Homo sapiens, clone RP11-45E1, complete sequence Length = 139438 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaata 262 ||||| ||||||||||||||||||| Sbjct: 115362 atataaaaatagatatagataaata 115338
>emb|BX649330.5| Zebrafish DNA sequence from clone CH211-140F21 in linkage group 22, complete sequence Length = 163964 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaata 262 ||||||||||||||||| ||||||| Sbjct: 48592 atatataaatagatatatataaata 48568
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 41606 atatataaatagatatagata 41626
>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05, complete sequence Length = 156888 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaata 262 ||||||||||||||||| ||||||| Sbjct: 114775 atatataaatagatatatataaata 114799
>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence Length = 201130 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 atataaatagatatagataaa 260 ||||||||||||||||||||| Sbjct: 7980 atataaatagatatagataaa 7960
>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence Length = 189849 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 88331 ataaatagatatagataaata 88311
>emb|BX248384.10| Zebrafish DNA sequence from clone CH211-233C3 in linkage group 8, complete sequence Length = 155293 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ttatttaggcatatataaatagata 252 |||||||||||||||| |||||||| Sbjct: 46776 ttatttaggcatatattaatagata 46800
>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2, complete sequence Length = 162145 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 taaatagatatagataaatag 263 ||||||||||||||||||||| Sbjct: 107371 taaatagatatagataaatag 107351
>dbj|AP003470.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1460A12 Length = 157679 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaata 262 ||||| ||||||||||||||||||| Sbjct: 5599 atataaaaatagatatagataaata 5623
>dbj|AP002846.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1084C9 Length = 176998 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaata 262 ||||| ||||||||||||||||||| Sbjct: 42667 atataaaaatagatatagataaata 42691
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 atatataaatagatatagata 258 ||||||||||||||||||||| Sbjct: 9659 atatataaatagatatagata 9679
>emb|AL831712.12| Mouse DNA sequence from clone RP23-118A20 on chromosome 4, complete sequence Length = 210976 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 154060 ataaatagatatagataaata 154080
>dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0319, complete sequence Length = 64598 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 45590 ataaatagatatagataaata 45610
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 ataaatagatatagataaata 262 ||||||||||||||||||||| Sbjct: 63020 ataaatagatatagataaata 63040
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 atagatatagataaataggt 265 |||||||||||||||||||| Sbjct: 11358 atagatatagataaataggt 11377
>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence Length = 208443 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaataggt 265 ||||||| ||||||||||||| |||||| Sbjct: 142634 atatatagatagatatagatagataggt 142661
>gb|AC165970.3| Mus musculus BAC clone RP23-129J20 from chromosome 6, complete sequence Length = 207303 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 16508 ataaatagatatagatagataggt 16531
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 atagatatagataaataggt 265 |||||||||||||||||||| Sbjct: 187883 atagatatagataaataggt 187902
>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence Length = 164971 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||||| |||| Sbjct: 10619 atatataaatagatatagacaaat 10642
>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence Length = 176395 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||||| |||| Sbjct: 137202 atatataaatagatatagacaaat 137225
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence Length = 195506 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 acacagaagtcacaccaaca 181 |||||||||||||||||||| Sbjct: 114510 acacagaagtcacaccaaca 114529
>gb|BC116447.1| Xenopus laevis cDNA clone MGC:130971 IMAGE:7975722, complete cds Length = 4924 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaataggt 265 ||||||||||| ||||| |||||||||| Sbjct: 2669 atatataaatatatataaataaataggt 2642
>emb|CR387998.9| Zebrafish DNA sequence from clone DKEY-29H15 in linkage group 1, complete sequence Length = 128837 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 atatataaatagatatagat 257 |||||||||||||||||||| Sbjct: 2799 atatataaatagatatagat 2780
>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence Length = 218179 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ttaggcatatataaatagat 251 |||||||||||||||||||| Sbjct: 136844 ttaggcatatataaatagat 136863
>gb|AE014312.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 9 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tatataaatagatatagata 258 |||||||||||||||||||| Sbjct: 128653 tatataaatagatatagata 128672
>gb|AC104594.2| Homo sapiens BAC clone RP13-620M21 from 7, complete sequence Length = 154665 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tatataaatagatatagata 258 |||||||||||||||||||| Sbjct: 71638 tatataaatagatatagata 71657
>gb|AC163242.3| Callicebus moloch clone LB5-73P23, complete sequence Length = 101102 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atataaatagatatagataa 259 |||||||||||||||||||| Sbjct: 12979 atataaatagatatagataa 12960
>emb|AL354803.24| Human DNA sequence from clone RP11-539I23 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 179380 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aagtcacaccaacaagtctt 187 |||||||||||||||||||| Sbjct: 107913 aagtcacaccaacaagtctt 107932
>emb|AL138954.16| Human DNA sequence from clone RP11-100K21 on chromosome 13q33.1-33.3, complete sequence Length = 144152 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tatataaatagatatagata 258 |||||||||||||||||||| Sbjct: 89938 tatataaatagatatagata 89957
>gb|AC133476.2| Homo sapiens 3 BAC RP11-73O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67388 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cacttgtccttcttctccct 305 |||||||||||||||||||| Sbjct: 21235 cacttgtccttcttctccct 21216
>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a novel gene, a glyoxalase 1 (Glo1) pseudogene and a pseudogene similar to part of nuclear pore membrane protein 121 Pom121, complete sequence Length = 212255 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tatataaatagatatagata 258 |||||||||||||||||||| Sbjct: 132823 tatataaatagatatagata 132842
>gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, complete sequence Length = 191115 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 183586 ataaatagatatagatagataggt 183609
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 atagatatagataaataggt 265 |||||||||||||||||||| Sbjct: 16841 atagatatagataaataggt 16860
>gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, complete sequence Length = 132288 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 117672 ataaatagatatagatagataggt 117695
>gb|AC055840.10| Homo sapiens chromosome 18, clone RP11-645I23, complete sequence Length = 175293 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 151725 ataaatagatatagatagataggt 151702
>gb|AC104940.2| Homo sapiens chromosome 8, clone RP11-378J9, complete sequence Length = 215962 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||| |||||| Sbjct: 93634 atatataaatagatatatataaat 93611
>gb|AC099756.2| Homo sapiens chromosome 1 clone RP11-180A14, complete sequence Length = 167302 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaataggt 265 ||||||| ||||||||||||| |||||| Sbjct: 120115 atatatatatagatatagatagataggt 120142
>gb|AC093559.2| Homo sapiens chromosome 1 clone RP11-138K16, complete sequence Length = 175909 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||| |||||| Sbjct: 116556 atatataaatagatatacataaat 116579
>gb|AC140242.5| Mus musculus BAC clone RP23-290N4 from chromosome 8, complete sequence Length = 168835 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 229 tatttaggcatatataaatagatatagataaatagg 264 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 148935 tatttaggcatatatatatatatatatatatatagg 148900
>gb|AC125145.3| Mus musculus BAC clone RP24-347B7 from chromosome 6, complete sequence Length = 186598 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 72328 ataaatagatatagatagataggt 72351
>gb|AC015522.6|AC015522 Homo sapiens chromosome 8, clone RP11-327O12, complete sequence Length = 147026 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||| |||||| Sbjct: 134338 atatataaatagatatatataaat 134361
>gb|AC158670.5| Mus musculus 6 BAC RP23-82N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227520 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 catatataaatagatataga 256 |||||||||||||||||||| Sbjct: 143963 catatataaatagatataga 143944
>gb|AC158654.3| Mus musculus 6 BAC RP24-375H22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190192 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 catatataaatagatataga 256 |||||||||||||||||||| Sbjct: 38534 catatataaatagatataga 38515
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ataggtcttccactcacaat 69 |||||||||||||||||||| Sbjct: 72113 ataggtcttccactcacaat 72094
>gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, complete sequence Length = 139409 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataggtcttccactcacaat 69 |||||||||||||||||||| Sbjct: 128944 ataggtcttccactcacaat 128963
>emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M3, complete sequence Length = 51166 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tatataaatagatatagata 258 |||||||||||||||||||| Sbjct: 43784 tatataaatagatatagata 43765
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 atataaatagatatagataaatag 263 ||||| |||||||||||||||||| Sbjct: 128466 atatatatagatatagataaatag 128443
>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the complete sequence Length = 220679 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 atatataaatagatatagataaat 261 ||||||||||||||||||| |||| Sbjct: 168501 atatataaatagatatagacaaat 168478
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataggtcttccactcacaat 69 |||||||||||||||||||| Sbjct: 374 ataggtcttccactcacaat 393
>gb|AC174643.3| Mus musculus BAC clone RP24-235D23 from chromosome 8, complete sequence Length = 197695 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 229 tatttaggcatatataaatagatatagataaatagg 264 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 165207 tatttaggcatatatatatatatatatatatatagg 165172
>gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, complete sequence Length = 152500 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 acacagaagtcacaccaaca 181 |||||||||||||||||||| Sbjct: 122078 acacagaagtcacaccaaca 122097
>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete sequence Length = 158699 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataggtcttccactcacaat 69 |||||||||||||||||||| Sbjct: 124219 ataggtcttccactcacaat 124238
>gb|AY098509.1| Ananas comosus PFE18 protein mRNA, partial cds Length = 1174 Score = 40.1 bits (20), Expect = 4.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 295 ttcttctccctggcgatgaggtccatcacagctcgtttgatgct 338 ||||||||| ||||| |||||||||||| || || |||||||| Sbjct: 921 ttcttctcctcggcgacgaggtccatcacggcgcgcttgatgct 878
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tccttcttctccctggcgat 311 |||||||||||||||||||| Sbjct: 4588352 tccttcttctccctggcgat 4588371
>gb|AC147371.4| Mus musculus BAC clone RP24-247D2 from 6, complete sequence Length = 178577 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ataaatagatatagataaataggt 265 ||||||||||||||||| |||||| Sbjct: 64308 ataaatagatatagatagataggt 64331
>gb|AC139182.4| Mus musculus BAC clone RP24-125O22 from 8, complete sequence Length = 159792 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 229 tatttaggcatatataaatagatatagataaatagg 264 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 56585 tatttaggcatatatatatatatatatatatatagg 56550
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atataaatagatatagataa 259 |||||||||||||||||||| Sbjct: 829233 atataaatagatatagataa 829214 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,539,023 Number of Sequences: 3902068 Number of extensions: 3539023 Number of successful extensions: 78973 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78581 Number of HSP's gapped (non-prelim): 392 length of query: 367 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 345 effective length of database: 17,147,199,772 effective search space: 5915783921340 effective search space used: 5915783921340 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)