Clone Name | rbastl14f02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PPNK1_PROMP (Q7V3C2) Probable inorganic polyphosphate/ATP-NAD ki... | 31 | 0.82 | 2 | DC12_XENTR (Q6P7N4) UPF0361 protein DC12 homolog | 30 | 1.8 | 3 | DC12_XENLA (Q6IND6) UPF0361 protein DC12 homolog | 29 | 2.4 | 4 | YMR7_YEAST (Q04371) Protein YMR027W | 28 | 5.3 | 5 | HM24_CAEEL (Q9NLC2) Homeobox protein ceh-24 | 27 | 9.1 | 6 | APJ_MACMU (O97666) Apelin receptor (G-protein coupled receptor A... | 27 | 9.1 | 7 | YRRI_BACSU (O34472) Hypothetical UPF0118 protein yrrI | 27 | 9.1 |
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>PPNK1_PROMP (Q7V3C2) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 299 Score = 30.8 bits (68), Expect = 0.82 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 7/42 (16%) Frame = -1 Query: 138 RAVPLWKDGT-C-----RDY-QSSQQSLPCKMFPLNYSLSHY 34 R + LWKDG+ C DY + ++ + PCKM N S+S+Y Sbjct: 237 REIKLWKDGSKCMTIKENDYCEINKVTKPCKMIKFNKSISYY 278
>DC12_XENTR (Q6P7N4) UPF0361 protein DC12 homolog| Length = 335 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -1 Query: 138 RAVPLWKDGTCRDYQSSQQSLPCKMFPLNYSLSHYQ 31 R P W+DG YQ S P P+ SL H+Q Sbjct: 27 RKWPNWRDGDSDKYQPSYNKSPQSNSPVLLSLKHFQ 62
>DC12_XENLA (Q6IND6) UPF0361 protein DC12 homolog| Length = 336 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1 Query: 129 PLWKDGTCRDYQSSQQSLPCKMFPLNYSLSHYQ 31 P W+DG YQ S P P+ SL H+Q Sbjct: 30 PKWRDGDTDKYQPSYNKSPQSNNPVLLSLKHFQ 62
>YMR7_YEAST (Q04371) Protein YMR027W| Length = 470 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 18 IHSLIDNGTKNNLEGTFYKGEIADWT--DNPCKFHPSTVELPLQSYNLIQLRTQSNYPRL 191 + + +G E +F+ E+ W N K+H S + LQ NL+ + NY +L Sbjct: 331 MEKFVSSGKIEFREDSFWTTELDYWNLDANETKYHGSILHKDLQKSNLVIFKGDLNYRKL 390
>HM24_CAEEL (Q9NLC2) Homeobox protein ceh-24| Length = 299 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = -1 Query: 144 FARAVPLWKDGTCRDYQSSQQSLPCKMFPLNYSLSHYQSMN 22 ++ A P W +G + ++ LPC + P+ +++H SM+ Sbjct: 105 YSGAQPNWYNGNDPRFAAAAALLPCSIDPVRSAINHQFSMS 145
>APJ_MACMU (O97666) Apelin receptor (G-protein coupled receptor APJ)| (Angiotensin receptor-like 1) Length = 380 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -1 Query: 177 WIGS*VGSDCSFARAVPLWKDGTCRDYQSSQQSLPCKMFPLNYSLSHYQSM 25 +I S +D +F +PLW T RDY + CK+ ++ Y S+ Sbjct: 67 FIASLAVADLTFVVTLPLWATYTYRDYDWPFGTFSCKLSSYLIFVNMYASV 117
>YRRI_BACSU (O34472) Hypothetical UPF0118 protein yrrI| Length = 353 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/70 (24%), Positives = 32/70 (45%) Frame = -2 Query: 287 PIITFRL*FGGEMVMMERDWVVGILAFLEPHYQSWVVGLGPELDQIVALQGQFHCGRMEL 108 P++ +L E + M + G+L + H W G+ +D+++ F G +E Sbjct: 94 PVLIVQLTDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIE- 152 Query: 107 AGIISPVSNL 78 G IS + N+ Sbjct: 153 -GAISGIRNV 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,750,884 Number of Sequences: 219361 Number of extensions: 1069254 Number of successful extensions: 2627 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2590 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2627 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)