ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl14f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY915781.1| Schistosoma japonicum SJCHGC09704 protein mRNA, partial cds Length = 709 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 7 aaagatgattcattcattcattgatt 32 |||||||||||||||||||||||||| Sbjct: 466 aaagatgattcattcattcattgatt 441
>gb|AY814730.1| Schistosoma japonicum SJCHGC09538 protein mRNA, complete cds Length = 1177 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 7 aaagatgattcattcattcattgatt 32 |||||||||||||||||||||||||| Sbjct: 994 aaagatgattcattcattcattgatt 969
>gb|AY808710.1| Schistosoma japonicum SJCHGC06913 protein mRNA, partial cds Length = 866 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 7 aaagatgattcattcattcattgatt 32 |||||||||||||||||||||||||| Sbjct: 690 aaagatgattcattcattcattgatt 665
>emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 in linkage group 14, complete sequence Length = 192331 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 |||||||||||||||||||||||| Sbjct: 8770 tgattcattcattcattgattgat 8793
>emb|AL669932.14| Mouse DNA sequence from clone RP23-430P1 on chromosome 2, complete sequence Length = 148257 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 tccccccaattttacacactgaa 374 ||||||||||||||||||||||| Sbjct: 33068 tccccccaattttacacactgaa 33046
>gb|AC089999.20| Homo sapiens 12 BAC RP11-545P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199522 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 atgattcattcattcattgatt 32 |||||||||||||||||||||| Sbjct: 174326 atgattcattcattcattgatt 174347
>gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, complete sequence Length = 191525 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 attcattcattcattgattgat 35 |||||||||||||||||||||| Sbjct: 61853 attcattcattcattgattgat 61874
>gb|AF121899.3| Homo sapiens chromosome 8 clone GS1-2d9 map 8q24.3, complete sequence Length = 57150 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 aagaaaagatgattcattcattcatt 28 |||| ||||||||||||||||||||| Sbjct: 15615 aagataagatgattcattcattcatt 15640
>emb|BX321884.15| Zebrafish DNA sequence from clone DKEYP-29A10 in linkage group 3, complete sequence Length = 173019 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 attcattcattcattgattgat 35 |||||||||||||||||||||| Sbjct: 147269 attcattcattcattgattgat 147290
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 aagaaaagatgattcattcattcatt 28 |||| ||||||||||||||||||||| Sbjct: 105899 aagataagatgattcattcattcatt 105924
>emb|AL929237.17| Zebrafish DNA sequence from clone CH211-213I16 in linkage group 20, complete sequence Length = 205393 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 attcattcattcattgattgat 35 |||||||||||||||||||||| Sbjct: 186476 attcattcattcattgattgat 186455
>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3, complete sequence Length = 159132 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 attcattcattcattgattgat 35 |||||||||||||||||||||| Sbjct: 132733 attcattcattcattgattgat 132712
>emb|BX323452.15| Zebrafish DNA sequence from clone DKEYP-56C5 in linkage group 25, complete sequence Length = 162709 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 attcattcattcattgattgat 35 |||||||||||||||||||||| Sbjct: 50688 attcattcattcattgattgat 50667
>gb|AC123692.25| Mus musculus chromosome 15, clone RP23-326B14, complete sequence Length = 202833 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 tgtggttccaagaaagcaaga 216 ||||||||||||||||||||| Sbjct: 164734 tgtggttccaagaaagcaaga 164754
>gb|AY324143.1| Desmognathus auriculatus clone Dau8 microsatellite sequence Length = 462 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 agaaaagatgattcattcattcatt 28 |||||||| |||||||||||||||| Sbjct: 164 agaaaagaggattcattcattcatt 188
>gb|AY915907.1| Schistosoma japonicum SJCHGC09844 protein mRNA, partial cds Length = 572 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 aaagatgattcattcattcat 27 ||||||||||||||||||||| Sbjct: 546 aaagatgattcattcattcat 526
>gb|AC123619.6| Mus musculus chromosome 13, clone RP23-43E21, complete sequence Length = 164264 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 73993 tgattcattcattcattgatt 74013 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 73977 tgattcattcattcattgatt 73997
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence Length = 178517 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 79105 tgattcattcattcattgatt 79085
>emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in linkage group 17, complete sequence Length = 113259 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgataatg 39 |||||||||||||| |||||||||| Sbjct: 107207 ttcattcattcatttattgataatg 107231
>emb|AL513348.12| Human DNA sequence from clone RP11-476H20 on chromosome 1 Contains a novel gene, complete sequence Length = 138641 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 129732 tgattcattcattcattgatt 129752
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 316418 atgaatcattcattcattgattgat 316442
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 315608 atgaatcattcattcattgattgat 315632
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 315605 atgaatcattcattcattgattgat 315629
>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene for pyrroline-5-carboxylate synthetase (glutamate gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for a novel protein (DKFZP564D116, FLJ40976), the 5' end of the ENTPD1 gene for ectonucleoside triphosphate diphosphohydrolase 1 and two CpG islands, complete sequence Length = 163166 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 14410 tgattcattcattcattgatt 14390
>emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in linkage group 9, complete sequence Length = 179053 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 70805 tgattcattcattcattgatt 70785
>gb|AC009318.11| Homo sapiens 12p BAC RP11-996F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203417 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 27646 tgattcattcattcattgatt 27666
>emb|AL627262.8| Zebrafish DNA sequence from clone RP71-1L7 in linkage group 15 Contains part of a novel gene similar to human GRID2 (ionotropic glutamate receptor delta 2) and a CpG island, complete sequence Length = 145079 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 34072 tgattcattcattcattgatt 34092
>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence Length = 215150 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 208647 ttcattcattcattgattgat 208627
>gb|AC092923.8| Homo sapiens 3 BAC RP11-145K15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150216 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 agaaaagatgattcattcattcatt 28 |||||||||| |||||||||||||| Sbjct: 29588 agaaaagatggttcattcattcatt 29612
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 71577 ttcattcattcattgattgat 71597
>gb|AC092274.2| Homo sapiens chromosome 5 clone CTC-537D8, complete sequence Length = 148579 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 aaatcacaatctaaaagttat 281 ||||||||||||||||||||| Sbjct: 38484 aaatcacaatctaaaagttat 38464
>emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in linkage group 16, complete sequence Length = 175187 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 33143 ttcattcattcattgattgat 33163
>gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chromosome unknown, complete sequence Length = 214676 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 206226 tgattcattcattcattgatt 206246
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 20540551 atgaatcattcattcattgattgat 20540527 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccaccacccaatccctttc 239 |||||||||||||||||||| Sbjct: 15484282 cccaccacccaatccctttc 15484301
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence Length = 178519 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 cccaccacccaatccctttcc 240 ||||||||||||||||||||| Sbjct: 140254 cccaccacccaatccctttcc 140234
>gb|AC130823.4| Mus musculus BAC clone RP23-320F5 from chromosome 15, complete sequence Length = 193211 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 actacccaagactgataatgt 198 ||||||||||||||||||||| Sbjct: 35222 actacccaagactgataatgt 35242
>gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, complete sequence Length = 110512 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cattcattcattgattgataatggg 41 |||||||||||| |||||||||||| Sbjct: 93259 cattcattcattcattgataatggg 93235
>emb|BX005182.13| Zebrafish DNA sequence from clone CH211-279M23 in linkage group 23, complete sequence Length = 155920 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 55444 tgattcattcattcattgatt 55424
>dbj|AK118261.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL19-56-D10 Length = 1186 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 577 ttcattcattcattgattgat 557
>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2, complete sequence Length = 200591 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 25313 ttcattcattcattgattgat 25333
>emb|CR536616.7| Zebrafish DNA sequence from clone CH211-264E16 in linkage group 18, complete sequence Length = 154119 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aagatgattcattcattcatt 28 ||||||||||||||||||||| Sbjct: 122848 aagatgattcattcattcatt 122828
>emb|BX537259.24| Zebrafish DNA sequence from clone CH211-241P10 in linkage group 20, complete sequence Length = 185460 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgatt 32 ||||||||||||||||||||| Sbjct: 111874 tgattcattcattcattgatt 111854
>emb|BX936364.6| Zebrafish DNA sequence from clone CH211-247G11 in linkage group 18, complete sequence Length = 146733 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 133192 ttcattcattcattgattgat 133172
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 143732 ttcattcattcattgattgat 143752
>emb|X98300.1|MIATNAD1C A.thaliana mitochondrial nad1 gene, exons 4 & 5, matr gene & nad5 gene, exon 1 Length = 4589 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 3772 ttcattcattcattgattgat 3752
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 20466765 atgaatcattcattcattgattgat 20466741 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cccaccacccaatccctttc 239 |||||||||||||||||||| Sbjct: 15438565 cccaccacccaatccctttc 15438584
>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143618 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 52682 atgaatcattcattcattgattgat 52706
>emb|AL935173.9| Zebrafish DNA sequence from clone CH211-196D9, complete sequence Length = 205213 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 attcattcattcattgattga 34 ||||||||||||||||||||| Sbjct: 15758 attcattcattcattgattga 15778
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 62368 ttcattcattcattgattgat 62348
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 27901 ttcattcattcattgattgat 27921
>gb|M63034.1|OBEMTNAD13 Oenothera berteriana mitochondrial NADH:ubiquinone oxidoreductase (nad1) DNA, exon 4 and 5 and complete cds Length = 4013 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattgat 35 ||||||||||||||||||||| Sbjct: 3372 ttcattcattcattgattgat 3352
>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete sequence Length = 217762 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 aaaagaaaagatgattcattc 21 ||||||||||||||||||||| Sbjct: 191252 aaaagaaaagatgattcattc 191272
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 atgattcattcattcattgattgat 35 |||| |||||||||||||||||||| Sbjct: 315463 atgaatcattcattcattgattgat 315487
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||| |||||||||||||||||| Sbjct: 41561 tgattgattcattcattgattgat 41538
>gb|U50310.1| Caenorhabditis elegans cosmid ZC487, complete sequence Length = 23688 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 270 tctaaaagttatgattgggccttattga 297 ||||||| |||||||||||| ||||||| Sbjct: 2539 tctaaaatttatgattgggcattattga 2566
>gb|AC152563.1| Ornithorhynchus anatinus chromosome UNK clone OABb-291A1, complete sequence Length = 169955 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 109844 agatgattcattcattcatt 109825
>ref|XM_482406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1837 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 1596 tgattcattcattcattgat 1577
>ref|XM_507232.1| PREDICTED Oryza sativa (japonica cultivar-group), P0433E10.14 mRNA Length = 1855 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 1595 tgattcattcattcattgat 1576
>ref|XM_479385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1768 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caccatttctcccccaaatc 265 |||||||||||||||||||| Sbjct: 54 caccatttctcccccaaatc 73
>gb|AC101908.8| Mus musculus chromosome 1, clone RP24-275J1, complete sequence Length = 164826 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 133355 tgattcattcattcattgat 133374
>gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, complete sequence Length = 192916 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 161241 tgattcattcattcattcattgat 161264
>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence Length = 175566 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 79422 tgattcattcattcattcattgat 79399
>gb|AC125156.3| Mus musculus BAC clone RP24-386H5 from chromosome 18, complete sequence Length = 189554 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 agatgattcattcattcattgatt 32 ||||| |||||||||||||||||| Sbjct: 9148 agatgcttcattcattcattgatt 9171
>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence Length = 199852 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 134098 attcattcattcattcattgataa 134075
>gb|AC138896.2| Homo sapiens chromosome 16 clone RP11-455M1, complete sequence Length = 158271 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 91034 ccctttccatcatcagcatttctc 91057
>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence Length = 194681 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 146305 tgattcattcattcattcattgat 146282
>gb|AC124478.5| Mus musculus BAC clone RP24-105I8 from chromosome 8, complete sequence Length = 159317 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 agatgattcattcattcattgattgata 36 |||||||| ||| ||||||||||||||| Sbjct: 15337 agatgattgattgattcattgattgata 15364
>gb|AC145285.2| Homo sapiens chromosome 16 clone RP11-1348G14, complete sequence Length = 219165 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 112481 ccctttccatcatcagcatttctc 112504
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 145725 tgattcattcattcattgat 145744
>emb|CR847845.5| Zebrafish DNA sequence from clone DKEY-124I15 in linkage group 14, complete sequence Length = 26956 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 12260 tgattcattcattcattcattgat 12237
>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete sequence Length = 189557 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 attcattcattcattgattg 33 |||||||||||||||||||| Sbjct: 140410 attcattcattcattgattg 140429
>gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, complete sequence Length = 182289 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 135383 ccctttccatcatcagcatttctc 135406
>gb|AC138824.2| Homo sapiens chromosome 16 clone RP11-1119F12, complete sequence Length = 134444 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 87061 ccctttccatcatcagcatttctc 87084
>gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-761H5, complete sequence Length = 156641 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 47502 ccctttccatcatcagcatttctc 47479
>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence Length = 199474 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 agatgattcattcattcattgattgata 36 |||||||| ||| ||||||||||||||| Sbjct: 120882 agatgattgattgattcattgattgata 120909
>emb|BX957345.6| Zebrafish DNA sequence from clone CH211-140O17 in linkage group 1, complete sequence Length = 85711 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aatgggacaaagaataattt 55 |||||||||||||||||||| Sbjct: 52386 aatgggacaaagaataattt 52405
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 183064 attcattcattcattcattgataa 183087
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 45098 attcattcattcatttattgataa 45075
>gb|AC158580.3| Mus musculus chromosome 1, clone RP24-97G17, complete sequence Length = 159618 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 107206 tgattcattcattcattgat 107187
>emb|AL357563.12| Human DNA sequence from clone RP11-9G10 on chromosome 6 Contains a novel FLJ14668 containing pseudogene, complete sequence Length = 70644 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 54967 tgattcattcattcattgat 54986
>emb|AL356584.21| Human DNA sequence from clone RP11-60C15 on chromosome 9 Contains part of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 165589 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 atgattcattcattcattga 30 |||||||||||||||||||| Sbjct: 66848 atgattcattcattcattga 66829
>emb|AL139187.19| Human DNA sequence from clone RP11-81F11 on chromosome 13 Contains a gene for a novel protein similar to RhoGAP, complete sequence Length = 166329 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 ttccaagaaagcaagaatacccac 224 ||||| |||||||||||||||||| Sbjct: 4150 ttccaggaaagcaagaatacccac 4127
>gb|AC124658.5| Homo sapiens chromosome 11, clone RP11-655D12, complete sequence Length = 163126 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 atttgagagataccaccaaa 328 |||||||||||||||||||| Sbjct: 60366 atttgagagataccaccaaa 60385
>gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, complete sequence Length = 136331 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 109406 ccctttccatcatcagcatttctc 109383
>emb|CR339060.11| Zebrafish DNA sequence from clone DKEY-276H21 in linkage group 23, complete sequence Length = 80855 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 73029 tgattcattcattcattcattgat 73052
>emb|AJ400877.1|HSA400877 Homo sapiens ASCL3 gene, CEGP1 gene, C11orf14 gene, C11orf15 gene, C11orf16 gene and C11orf17 gene Length = 256164 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 atttgagagataccaccaaa 328 |||||||||||||||||||| Sbjct: 210687 atttgagagataccaccaaa 210668
>gb|AC127453.2| Homo sapiens chromosome 16 clone CTA-115H5, complete sequence Length = 63736 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 21729 ccctttccatcatcagcatttctc 21706
>emb|BX942831.16| Zebrafish DNA sequence from clone CH211-62B4 in linkage group 5, complete sequence Length = 147881 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||| |||||||||||||| Sbjct: 114896 tgattcattgattcattgattgat 114873
>emb|AL845302.4| Zebrafish DNA sequence from clone CH211-108C6 in linkage group 5 Contains part of a novel gene similar to human SSH1 (slingshot 1), a novel gene, part of a novel gene similar to human CORO1C (actin binding protein coronin 1C) and a CpG island, complete sequence Length = 147219 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||||||| |||||||||||||| Sbjct: 123106 tgattcatttattcattgattgat 123129
>gb|AC026894.7| Homo sapiens chromosome , clone RP11-318C2, complete sequence Length = 224761 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 atttgagagataccaccaaa 328 |||||||||||||||||||| Sbjct: 88817 atttgagagataccaccaaa 88798
>emb|BX908401.14| Zebrafish DNA sequence from clone DKEY-53F14 in linkage group 18, complete sequence Length = 172346 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 80822 agatgattcattcattcatt 80803
>emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 in linkage group 6, complete sequence Length = 218236 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 60409 agatgattcattcattcatt 60428
>gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, complete sequence Length = 188609 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 aaagatgattcattcattcattga 30 ||||||||||||||||||| |||| Sbjct: 123890 aaagatgattcattcattccttga 123867
>emb|CR354426.9| Zebrafish DNA sequence from clone DKEY-48G21 in linkage group 1, complete sequence Length = 196432 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aatgggacaaagaataattt 55 |||||||||||||||||||| Sbjct: 25280 aatgggacaaagaataattt 25261
>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence Length = 125551 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cattcattcattgattgata 36 |||||||||||||||||||| Sbjct: 15257 cattcattcattgattgata 15276
>gb|AC026396.8| Homo sapiens chromosome 10 clone RP11-89K18, complete sequence Length = 162057 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ttcctcccctgaatcccccc 358 |||||||||||||||||||| Sbjct: 82926 ttcctcccctgaatcccccc 82945
>gb|U91326.1|HUU91326 Homo sapiens chromosome 16 BAC clone CIT987SK-A-234F9, complete sequence Length = 150296 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 95477 ccctttccatcatcagcatttctc 95454
>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence Length = 172123 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 56384 attcattcattcattcattgataa 56407
>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence Length = 194973 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cctttccatcatcaccattt 253 |||||||||||||||||||| Sbjct: 73903 cctttccatcatcaccattt 73922
>gb|AC091996.3| Homo sapiens chromosome 5 clone RP11-96G10, complete sequence Length = 182797 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 actttgagatatttgagaga 318 |||||||||||||||||||| Sbjct: 36139 actttgagatatttgagaga 36120
>gb|AC093251.2| Homo sapiens chromosome 5 clone RP11-156N15, complete sequence Length = 62147 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cattcattcattgattgata 36 |||||||||||||||||||| Sbjct: 7567 cattcattcattgattgata 7548
>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 136667 attcattcattcattcattgataa 136690
>ref|NM_022441.1| Rattus norvegicus activin A receptor type II-like 1 (Acvrl1), mRNA Length = 3917 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 caactcaggacccaatccaactac 182 ||||||||||||||| |||||||| Sbjct: 203 caactcaggacccaaaccaactac 180
>emb|BX572641.10| Zebrafish DNA sequence from clone CH211-213N22 in linkage group 12, complete sequence Length = 183309 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||| |||||||||||||| Sbjct: 51480 tgattcattgattcattgattgat 51457
>emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 in linkage group 17, complete sequence Length = 184290 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||| |||||||||||||||||| Sbjct: 98446 tgattgattcattcattgattgat 98469
>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24, complete sequence Length = 155029 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctggactgataatccctgca 108 |||||||||||||||||||| Sbjct: 95073 ctggactgataatccctgca 95092
>emb|BX005348.9| Zebrafish DNA sequence from clone DKEY-245J21 in linkage group 11, complete sequence Length = 145299 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 attcattcattcattgattg 33 |||||||||||||||||||| Sbjct: 63189 attcattcattcattgattg 63170
>gb|AC004955.3| Homo sapiens PAC clone RP5-1087M19 from 7, complete sequence Length = 120557 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atttagagggaacattttac 71 |||||||||||||||||||| Sbjct: 45817 atttagagggaacattttac 45836
>gb|AC103362.7| Mus musculus chromosome 18, clone RP24-87N19, complete sequence Length = 170674 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 agatgattcattcattcattgatt 32 ||||| |||||||||||||||||| Sbjct: 28682 agatgcttcattcattcattgatt 28659
>emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in linkage group 11, complete sequence Length = 229237 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 attcattcattcattgattg 33 |||||||||||||||||||| Sbjct: 70107 attcattcattcattgattg 70088
>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete sequence Length = 179977 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 83683 tgattcattcattcattcattgat 83660
>emb|BX294001.10| Zebrafish DNA sequence from clone BUSM1-241N23, complete sequence Length = 13955 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 2226 attcattcattcattcattgataa 2249
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 19877039 tgattcattcattcattgat 19877058
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caccatttctcccccaaatc 265 |||||||||||||||||||| Sbjct: 27491748 caccatttctcccccaaatc 27491767
>gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, complete sequence Length = 169127 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 35792 ccctttccatcatcagcatttctc 35769
>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18, complete sequence Length = 153244 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctggactgataatccctgca 108 |||||||||||||||||||| Sbjct: 95028 ctggactgataatccctgca 95047
>emb|BX088690.9| Zebrafish DNA sequence from clone CH211-211A20 in linkage group 18, complete sequence Length = 218713 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 gaaaagatgattcattcattcatt 28 |||| ||||||||||||||||||| Sbjct: 155540 gaaatgatgattcattcattcatt 155517
>gb|AC093747.2| Homo sapiens BAC clone RP11-29L8 from 4, complete sequence Length = 146950 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 10873 ttcattcattcattgattga 10892
>emb|BX088566.6| Zebrafish DNA sequence from clone DKEY-63E5 in linkage group 6, complete sequence Length = 195778 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 103330 agatgattcattcattcatt 103311
>gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, complete sequence Length = 224150 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 160546 ccctttccatcatcagcatttctc 160523
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 attcattcattcattgattgataa 37 ||||||||||||||| |||||||| Sbjct: 172708 attcattcattcatttattgataa 172685
>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete sequence Length = 205208 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atttagagggaacattttac 71 |||||||||||||||||||| Sbjct: 136324 atttagagggaacattttac 136305
>gb|AC019109.9| Homo sapiens BAC clone RP11-488C22 from 2, complete sequence Length = 165351 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gattcattcattcattgatt 32 |||||||||||||||||||| Sbjct: 1938 gattcattcattcattgatt 1957
>gb|AC116346.2| Homo sapiens chromosome 16 clone RP11-24N18, complete sequence Length = 160521 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 48583 ccctttccatcatcagcatttctc 48606
>gb|AC133912.3| Homo sapiens chromosome 16 clone CTC-506N3, complete sequence Length = 128703 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccctttccatcatcaccatttctc 256 ||||||||||||||| |||||||| Sbjct: 110596 ccctttccatcatcagcatttctc 110619
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caccatttctcccccaaatc 265 |||||||||||||||||||| Sbjct: 55719 caccatttctcccccaaatc 55738
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 45217 tgattcattcattcattgat 45236
>emb|AL954317.8| Zebrafish DNA sequence from clone DKEY-251I8 in linkage group 1, complete sequence Length = 97165 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 74721 tgattcattcattcattcattgat 74744
>gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clone PAC P704-39J11, complete sequence Length = 161121 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 60595 ttcattcattcattgattga 60614
>emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 in linkage group 8, complete sequence Length = 185135 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 |||||||||||| ||||||||||| Sbjct: 156226 tgattcattcatccattgattgat 156249
>emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in linkage group 1, complete sequence Length = 148904 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 4484 agatgattcattcattcatt 4503
>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6, complete sequence Length = 223000 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 213933 agatgattcattcattcatt 213914
>dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, map 22, complete sequences Length = 214189 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 88914 ttcattcattcattgattga 88933
>emb|BX537104.9| Zebrafish DNA sequence from clone DKEY-80G18 in linkage group 15, complete sequence Length = 198108 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||| |||||||||||||||||| Sbjct: 167081 tgattgattcattcattgattgat 167104
>gb|AF145729.1|AF145729 Oryza sativa homeodomain leucine zipper protein (Oshox5) mRNA, complete cds Length = 1538 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 1315 tgattcattcattcattgat 1296
>emb|BX648337.1|HSM808485 Homo sapiens mRNA; cDNA DKFZp686K235 (from clone DKFZp686K235) Length = 6291 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 4054 ttcattcattcattgattga 4035
>emb|BX511013.9| Zebrafish DNA sequence from clone DKEY-221I2 in linkage group 20, complete sequence Length = 161346 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||| |||||||||||||| Sbjct: 65800 tgattcattgattcattgattgat 65777
>dbj|AK101569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050G15, full insert sequence Length = 1836 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 1595 tgattcattcattcattgat 1576
>dbj|AK100634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A12, full insert sequence Length = 1854 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 1594 tgattcattcattcattgat 1575
>dbj|AK073258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L05, full insert sequence Length = 1768 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caccatttctcccccaaatc 265 |||||||||||||||||||| Sbjct: 54 caccatttctcccccaaatc 73
>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 Length = 340000 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 264365 ttcattcattcattgattga 264384
>emb|BX890618.14| Zebrafish DNA sequence from clone DKEYP-18A5 in linkage group 18, complete sequence Length = 88593 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 gaaaagatgattcattcattcatt 28 |||| ||||||||||||||||||| Sbjct: 35595 gaaatgatgattcattcattcatt 35572
>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22, complete sequence Length = 183551 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 132361 tgattcattcattcattcattgat 132384
>emb|BX537162.5| Zebrafish DNA sequence from clone DKEY-9A20 in linkage group 4, complete sequence Length = 223816 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 211774 agatgattcattcattcatt 211793
>emb|BX537169.4| Zebrafish DNA sequence from clone DKEYP-60G2 in linkage group 4, complete sequence Length = 110319 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tgattcattcattcattgat 31 |||||||||||||||||||| Sbjct: 41493 tgattcattcattcattgat 41474
>emb|BX284679.5| Zebrafish DNA sequence from clone CH211-13N20 in linkage group 20, complete sequence Length = 105328 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 88211 agatgattcattcattcatt 88230
>emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in linkage group 3, complete sequence Length = 165569 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gagggaacattttacaaggg 76 |||||||||||||||||||| Sbjct: 164182 gagggaacattttacaaggg 164163
>emb|AL929374.7| Zebrafish DNA sequence from clone CH211-89M7 in linkage group 5, complete sequence Length = 179521 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agatgattcattcattcatt 28 |||||||||||||||||||| Sbjct: 35719 agatgattcattcattcatt 35738
>emb|X57965.1|TANAD1MAT Triticum aestivum mitochondrial matR gene & nad1 gene, exon 5 Length = 3159 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tcattcattcattgattgat 35 |||||||||||||||||||| Sbjct: 2599 tcattcattcattgattgat 2580
>gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 map 4q25, complete sequence Length = 143839 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gattcattcattcattgatt 32 |||||||||||||||||||| Sbjct: 124105 gattcattcattcattgatt 124124
>gb|U44893.1|BFU44893 Butyrivibrio fibrisolvens cinnamoyl ester hydrolase (cinI) gene, complete cds, and aldoketoreductase (akrI) gene, partial cds Length = 2292 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaagaataatttagagggaa 63 |||||||||||||||||||| Sbjct: 1568 aaagaataatttagagggaa 1549
>gb|L36088.1|RATSTKR Rattus norvegicus (clone RSTK-1) serine-threonine kinase receptor type I mRNA, complete cds Length = 3917 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 caactcaggacccaatccaactac 182 ||||||||||||||| |||||||| Sbjct: 203 caactcaggacccaaaccaactac 180
>emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb0066P16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126680 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cccaccacccaatccctttc 239 |||||||||||||||||||| Sbjct: 18205 cccaccacccaatccctttc 18186
>emb|CR352286.6| Zebrafish DNA sequence from clone CH211-93A20 in linkage group 19, complete sequence Length = 147941 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 atgattcattcattcattgattga 34 |||||||||||||||||| ||||| Sbjct: 66570 atgattcattcattcatttattga 66547
>emb|BX897750.11| Zebrafish DNA sequence from clone DKEY-278N18, complete sequence Length = 182033 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||||||||||||||| |||||| Sbjct: 69063 tgattcattcattcattaattgat 69040
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcattcattcattgattgat 35 |||||||||||||||||||| Sbjct: 43825 tcattcattcattgattgat 43844
>emb|AL935188.7| Zebrafish DNA sequence from clone CH211-243G6, complete sequence Length = 160946 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgataatg 39 ||||| ||||||| |||||||||||||| Sbjct: 28051 tgattgattcattgattgattgataatg 28024
>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence Length = 166914 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cctttccatcatcaccattt 253 |||||||||||||||||||| Sbjct: 24034 cctttccatcatcaccattt 24053
>emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from PAC RPCI-1 152M24 map 21q21 region D21S189-LA297, complete sequence Length = 116137 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 22188 ttcattcattcattgattga 22207
>emb|AJ010598.1|HS135E14 Homo sapiens chromosome 21 PAC RPCIP704E14135Q2, complete sequence Length = 135855 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcattcattcattgattga 34 |||||||||||||||||||| Sbjct: 135004 ttcattcattcattgattga 135023
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tgattcattcattcattgattgat 35 ||||| |||||||||||||||||| Sbjct: 109653 tgattgattcattcattgattgat 109630 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,206,213 Number of Sequences: 3902068 Number of extensions: 5206213 Number of successful extensions: 274427 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 272588 Number of HSP's gapped (non-prelim): 1823 length of query: 390 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 368 effective length of database: 17,147,199,772 effective search space: 6310169516096 effective search space used: 6310169516096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
