>ATPA_VIBCH (Q9KNH3) ATP synthase alpha chain (EC 3.6.3.14) (ATP synthase F1|
           sector alpha subunit)
          Length = 513

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 43  TKRQSIHPHTVPGFSKQKLVLPTTIYIQSSVIRCITRGLLCYLE 174
           TKRQ  H   V    KQK   P +++ Q+ VI    RG L  +E
Sbjct: 417 TKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVE 460

>KTHY_ACIAD (Q6F9B5) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 202

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 16  DIYKLLMFYTKRQSIHPHTVPGFSKQKLVLPTTIYIQSSVIRCITRGL 159
           D   LLM+  + Q +    VP  + +KLVL       S   +C+ RGL
Sbjct: 62  DTELLLMYAARAQHLQQVIVPALADEKLVLSDRFTDASYAYQCVGRGL 109

>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG|
          Length = 931

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -1

Query: 349 VASASHDKHVKLWK 308
           VASASHDK VKLWK
Sbjct: 918 VASASHDKLVKLWK 931

>VWF_BOVIN (P80012) Von Willebrand factor precursor (vWF) (Fragment)|
          Length = 937

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 208 LLCDLESLQHRPQKPFAHPPRLWFKARAVVRRFISTASRACHGSLRP 348
           L  D E LQ +P  P +  PRL   A        S    ACH ++ P
Sbjct: 554 LRADCEDLQEQPSDPCSLNPRLTKFADQACAILTSPKFEACHSAVSP 600

>ZN549_PONPY (Q5RBQ3) Zinc finger protein 549|
          Length = 640

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = +1

Query: 85  SKQKLVLPTTIYIQSSVIRCITRGLLCYLES--LQHQLCITRGLLCDLESLQHRPQKPFA 258
           SKQ L+    I+ +     C   G   YLE   LQHQ   TR  LC+         K F+
Sbjct: 484 SKQTLIKHHKIHTRERPYECSECGKGFYLEVKLLQHQRIHTREKLCECNEC----GKVFS 539

Query: 259 HPPRL 273
           H  RL
Sbjct: 540 HQKRL 544

>MAAZ4_SCHCO (P37938) Mating-type protein A-alpha Z4|
          Length = 940

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 156 AIMLSRVSPAPALHN*GAIMRSRVSPAPAAKAVCSSTTVM 275
           AI +S  SPAP+    G+   S VSP+P AK    +T+++
Sbjct: 506 AIRVSLPSPAPSSR--GSTPTSPVSPSPKAKRPAQATSLL 543

>ZITB_ERWCT (Q6D7E5) Zinc transporter zitB|
          Length = 320

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 61  HPHTVPGFSKQKLV--LPTTIYIQSSVIRCITRGLLCYLESLQHQLCITRGLLCDLESLQ 234
           H HT  G SK+ L   + T  ++ + VI  +  G L  L    H L     L   L +++
Sbjct: 5   HSHTESGNSKRLLAAFIITATFMVAEVIGGLLSGSLALLADAGHMLTDAAALFVALVAVR 64

Query: 235 HRPQKPFA 258
              +KP A
Sbjct: 65  FAQRKPNA 72

>POLG_HCVSA (O91936) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3013

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +1

Query: 166 YLESLQHQLCI----TRGLLCDLESLQHRPQKPFAHPPRLW 276
           Y+  L+H+L +    TRG  CDLE        P  H    W
Sbjct: 632 YIGGLEHRLEVACNWTRGERCDLEDRDRAELSPLLHTTTQW 672


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,466,210
Number of Sequences: 219361
Number of extensions: 882639
Number of successful extensions: 2008
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)