Clone Name | rbastl14f01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aaaaggcaatcaatccaccct 66 ||||||||||||||||||||| Sbjct: 1909961 aaaaggcaatcaatccaccct 1909941
>gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, complete sequence Length = 45765 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 aagcaaaagcttgtacttccaaca 111 ||||||||||||||| |||||||| Sbjct: 19889 aagcaaaagcttgtagttccaaca 19912
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agatagatatatataagctg 30 |||||||||||||||||||| Sbjct: 2918728 agatagatatatataagctg 2918709
>gb|AC122333.2| Mus musculus BAC clone RP23-346J12 from chromosome 6, complete sequence Length = 174665 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aagcttgtacttccaacaac 113 |||||||||||||||||||| Sbjct: 89164 aagcttgtacttccaacaac 89183
>gb|AC007026.3| Homo sapiens PAC clone RP4-751G11 from 7, complete sequence Length = 120809 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ttagcaagcaaaagcttgta 102 |||||||||||||||||||| Sbjct: 95744 ttagcaagcaaaagcttgta 95725
>gb|AC146185.2| Pan troglodytes BAC clone RP43-35O6 from 7, complete sequence Length = 156598 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ttagcaagcaaaagcttgta 102 |||||||||||||||||||| Sbjct: 36773 ttagcaagcaaaagcttgta 36792
>emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segment 1/7 Length = 349544 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tatacaaaaaggcaatcaat 59 |||||||||||||||||||| Sbjct: 17246 tatacaaaaaggcaatcaat 17265
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 atttccacagcttcacgtgcttgtcatg 334 ||||||||||||||||||| ||| |||| Sbjct: 38938 atttccacagcttcacgtggttgccatg 38965
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agatagatatatataagctg 30 |||||||||||||||||||| Sbjct: 56215 agatagatatatataagctg 56196
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agatagatatatataagctg 30 |||||||||||||||||||| Sbjct: 2918839 agatagatatatataagctg 2918820
>emb|BX119968.5| Mouse DNA sequence from clone RP23-375D12 on chromosome X, complete sequence Length = 190433 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaactcagatagatatatat 24 |||||||||||||||||||| Sbjct: 175912 aaactcagatagatatatat 175931
>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence Length = 208713 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aagcaaaagcttgtacttccaaca 111 ||||||||||||||| |||||||| Sbjct: 89587 aagcaaaagcttgtagttccaaca 89564 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,746,995 Number of Sequences: 3902068 Number of extensions: 2746995 Number of successful extensions: 50885 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50818 Number of HSP's gapped (non-prelim): 67 length of query: 349 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 327 effective length of database: 17,147,199,772 effective search space: 5607134325444 effective search space used: 5607134325444 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)