Clone Name | rbastl14e10 |
---|---|
Clone Library Name | barley_pub |
>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 841 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +2 Query: 2 GISGKN*TSSSQLLYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTSEPP 157 G+S ++ S Q + Y G+++ +S+R + AS NW N H PP Sbjct: 25 GVSRRSKYSQQQSQHYYYGHNQ-------SSYRDSGASHPNWKRNAHLMPPP 69
>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)| Length = 843 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 233 ATENTILGSAKGPNRSSPRGGLGARRL 313 ++E+T+ GS G R S RGG GAR + Sbjct: 712 SSEDTVGGSGSGSGRGSSRGGGGAREI 738
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +2 Query: 134 NKHTSEPPSFNLTDIPRENRLQKTEMLLRSRSDATENTILGSAK 265 NK T E P F + ++ + N Q ++LL +AT I+G+++ Sbjct: 522 NKLTGETPQFEVLELEKFNDEQIRQVLLYQAEEATVEQIMGNSQ 565
>ARGC_XYLFA (Q9PEM6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 333 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +3 Query: 24 LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 188 L LPN Y I ATA PPT + + ++ T F + + LP LT T+ G+ Sbjct: 77 LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128 Query: 189 TGYRKQKCYSALARM 233 CY+ ++ Sbjct: 129 KRISNPGCYATAMQL 143
>ARGC_XYLFT (Q87EL1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 327 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +3 Query: 24 LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 188 L LPN Y I ATA PPT + + ++ T F + + LP LT T+ G+ Sbjct: 77 LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128 Query: 189 TGYRKQKCYSALARM 233 CY+ ++ Sbjct: 129 KRISNPGCYATAMQL 143
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 86 VTSHRSTRASQQNWLHNKHTSEPPSFNLTDIPRENR 193 V SH S RA+ Q + EPP F+ IP+ +R Sbjct: 516 VRSHESLRATLQRAPSPREPGEPPLFSRPSIPKTSR 551
>TAH18_DEBHA (Q6BR77) Probable NADPH reductase TAH18 (EC 1.-.-.-)| Length = 603 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 158 SFNLTDIPRENRLQKTEMLLRSRSDATENTILGSAKGPNRSSPRG 292 S N D+P N TE+ L D + N +LGS K R + G Sbjct: 184 SSNELDVPTSN--SPTELSLTRMGDGSTNLLLGSVKANKRITKEG 226
>IGF2_MOUSE (P09535) Insulin-like growth factor II precursor| (Multiplication-stimulating polypeptide) (IGF-II) Length = 180 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 140 VCCEASFAGWLVYCGGRLPDR*QFLC 63 +CC A++ CGG L D QF+C Sbjct: 20 LCCIAAYGPGETLCGGELVDTLQFVC 45
>XYLA_ENTFA (Q7C3R3) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -1 Query: 264 FAEPRIVFSVASERERSSISVFCSRFSRGMSVKLKLGGSD 145 F+ PR V AS + ++ ++ +G+ V KLGG + Sbjct: 143 FSNPRYVNGAASTNNANVYAIAAAQVKKGLDVSKKLGGEN 182
>KIT_HUMAN (P10721) Mast/stem cell growth factor receptor precursor (EC| 2.7.10.1) (SCFR) (Proto-oncogene tyrosine-protein kinase Kit) (c-kit) (CD117 antigen) Length = 976 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 41 LYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTSEPPSFN 166 L N+L R++ IC + A +N LH+K +S S N Sbjct: 678 LLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTN 719
>BTBD4_MOUSE (Q8BID6) BTB/POZ domain-containing protein 4| Length = 600 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 166 LNRHSPGEPATENRNATPLSLGCHRKHNSWLGKRTQPIISTGGSWCSS 309 L+ G PA+ + A ++ R + WL +RT P S+G S +S Sbjct: 141 LSEFEIGTPASNSTEALISAVMAGRSISPWLARRTSPANSSGDSAIAS 188
>IGF2_PIG (P23695) Insulin-like growth factor II precursor (IGF-II)| Length = 181 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 137 CCEASFAGWLVYCGGRLPDR*QFLC 63 CC A++ CGG L D QF+C Sbjct: 21 CCYAAYRPSETLCGGELVDTLQFVC 45
>PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 179 PRENRLQKTEMLLRSRSDATENTILGSAKGPNRSSPRGGLGARR 310 P++ R+ + +L R + T T++ S+ P+R P G+G R Sbjct: 12 PKKGRVCSSLLLERHPASGTLTTMVDSSAPPSRKRPGAGVGRPR 55
>HQGT_RAUSE (Q9AR73) Hydroquinone glucosyltransferase (EC 2.4.1.218) (Arbutin| synthase) Length = 470 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -2 Query: 182 GECLLS*NWEVQMYVCCEASFAGWLVYCG 96 G CLL +W Q + S G+L +CG Sbjct: 334 GRCLLVPSWAPQTEILSHGSTGGFLTHCG 362
>IGF2_MUSVI (P41694) Insulin-like growth factor II precursor (IGF-II)| (Fragment) Length = 129 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -2 Query: 182 GECLLS*NWEVQMYVCCEASFAGWLVYCGGRLPDR*QFLC 63 G+ LL+ + + CC A++ CGG L D QF+C Sbjct: 6 GKSLLAPLTFLALASCCFAAYRPSETLCGGELVDTLQFVC 45
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 26 SSSQLLYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTS 148 S+ LL N LGN ++I + ++ +TR Q+ W+ + S Sbjct: 510 SALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNS 550
>IGF2_RAT (P01346) Insulin-like growth factor II precursor (IGF-II)| (Multiplication-stimulating polypeptide) (Multiplication-stimulating activity) (MSA) Length = 180 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 140 VCCEASFAGWLVYCGGRLPDR*QFLC 63 +CC A++ CGG L D QF+C Sbjct: 20 LCCIAAYRPSETLCGGELVDTLQFVC 45
>IGF2_SHEEP (P10764) Insulin-like growth factor II precursor (IGF-II)| Length = 179 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 137 CCEASFAGWLVYCGGRLPDR*QFLC 63 CC A++ CGG L D QF+C Sbjct: 21 CCYAAYRPSETLCGGELVDTLQFVC 45
>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 510 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = +2 Query: 86 VTSHRSTRA-SQQNWLHNKHTSEPPSFNLTDIPRENRLQKTEMLLRSRSDATEN-TILGS 259 V +++T + S + W + + P ++ E++L E SD+TE+ +LG Sbjct: 19 VARYQNTESKSSEEWKGHLAQTPTPPLESSESSEESKLSSEEQANEDPSDSTESEEVLGL 78 Query: 260 AKGPNRSSPRGGLGAR 307 + P GGL R Sbjct: 79 DDQQHVHRPAGGLSRR 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,162,330 Number of Sequences: 219361 Number of extensions: 937905 Number of successful extensions: 2500 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2461 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2500 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)