ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot... 30 1.2
2HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10) 30 2.0
3YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466 30 2.0
4ARGC_XYLFA (Q9PEM6) N-acetyl-gamma-glutamyl-phosphate reductase ... 29 3.4
5ARGC_XYLFT (Q87EL1) N-acetyl-gamma-glutamyl-phosphate reductase ... 29 3.4
6SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot... 28 4.5
7TAH18_DEBHA (Q6BR77) Probable NADPH reductase TAH18 (EC 1.-.-.-) 28 5.8
8IGF2_MOUSE (P09535) Insulin-like growth factor II precursor (Mul... 28 5.8
9XYLA_ENTFA (Q7C3R3) Xylose isomerase (EC 5.3.1.5) 28 7.6
10KIT_HUMAN (P10721) Mast/stem cell growth factor receptor precurs... 28 7.6
11BTBD4_MOUSE (Q8BID6) BTB/POZ domain-containing protein 4 28 7.6
12IGF2_PIG (P23695) Insulin-like growth factor II precursor (IGF-II) 27 9.9
13PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1) ... 27 9.9
14HQGT_RAUSE (Q9AR73) Hydroquinone glucosyltransferase (EC 2.4.1.2... 27 9.9
15IGF2_MUSVI (P41694) Insulin-like growth factor II precursor (IGF... 27 9.9
16PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transpor... 27 9.9
17IGF2_RAT (P01346) Insulin-like growth factor II precursor (IGF-I... 27 9.9
18IGF2_SHEEP (P10764) Insulin-like growth factor II precursor (IGF... 27 9.9
19DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precur... 27 9.9

>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 2   GISGKN*TSSSQLLYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTSEPP 157
           G+S ++  S  Q  + Y G+++       +S+R + AS  NW  N H   PP
Sbjct: 25  GVSRRSKYSQQQSQHYYYGHNQ-------SSYRDSGASHPNWKRNAHLMPPP 69



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>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)|
          Length = 843

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 233 ATENTILGSAKGPNRSSPRGGLGARRL 313
           ++E+T+ GS  G  R S RGG GAR +
Sbjct: 712 SSEDTVGGSGSGSGRGSSRGGGGAREI 738



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>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466|
          Length = 1526

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 134 NKHTSEPPSFNLTDIPRENRLQKTEMLLRSRSDATENTILGSAK 265
           NK T E P F + ++ + N  Q  ++LL    +AT   I+G+++
Sbjct: 522 NKLTGETPQFEVLELEKFNDEQIRQVLLYQAEEATVEQIMGNSQ 565



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>ARGC_XYLFA (Q9PEM6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 333

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = +3

Query: 24  LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 188
           L LPN     Y   I ATA        PPT + + ++ T F  + +  LP LT  T+ G+
Sbjct: 77  LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128

Query: 189 TGYRKQKCYSALARM 233
                  CY+   ++
Sbjct: 129 KRISNPGCYATAMQL 143



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>ARGC_XYLFT (Q87EL1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 327

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = +3

Query: 24  LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 188
           L LPN     Y   I ATA        PPT + + ++ T F  + +  LP LT  T+ G+
Sbjct: 77  LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128

Query: 189 TGYRKQKCYSALARM 233
                  CY+   ++
Sbjct: 129 KRISNPGCYATAMQL 143



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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3259

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 86  VTSHRSTRASQQNWLHNKHTSEPPSFNLTDIPRENR 193
           V SH S RA+ Q     +   EPP F+   IP+ +R
Sbjct: 516 VRSHESLRATLQRAPSPREPGEPPLFSRPSIPKTSR 551



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>TAH18_DEBHA (Q6BR77) Probable NADPH reductase TAH18 (EC 1.-.-.-)|
          Length = 603

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 158 SFNLTDIPRENRLQKTEMLLRSRSDATENTILGSAKGPNRSSPRG 292
           S N  D+P  N    TE+ L    D + N +LGS K   R +  G
Sbjct: 184 SSNELDVPTSN--SPTELSLTRMGDGSTNLLLGSVKANKRITKEG 226



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>IGF2_MOUSE (P09535) Insulin-like growth factor II precursor|
           (Multiplication-stimulating polypeptide) (IGF-II)
          Length = 180

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 140 VCCEASFAGWLVYCGGRLPDR*QFLC 63
           +CC A++      CGG L D  QF+C
Sbjct: 20  LCCIAAYGPGETLCGGELVDTLQFVC 45



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>XYLA_ENTFA (Q7C3R3) Xylose isomerase (EC 5.3.1.5)|
          Length = 435

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 264 FAEPRIVFSVASERERSSISVFCSRFSRGMSVKLKLGGSD 145
           F+ PR V   AS    +  ++  ++  +G+ V  KLGG +
Sbjct: 143 FSNPRYVNGAASTNNANVYAIAAAQVKKGLDVSKKLGGEN 182



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>KIT_HUMAN (P10721) Mast/stem cell growth factor receptor precursor (EC|
           2.7.10.1) (SCFR) (Proto-oncogene tyrosine-protein kinase
           Kit) (c-kit) (CD117 antigen)
          Length = 976

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 41  LYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTSEPPSFN 166
           L N+L   R++ IC      +  A  +N LH+K +S   S N
Sbjct: 678 LLNFLRRKRDSFICSKQEDHAEAALYKNLLHSKESSCSDSTN 719



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>BTBD4_MOUSE (Q8BID6) BTB/POZ domain-containing protein 4|
          Length = 600

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 166 LNRHSPGEPATENRNATPLSLGCHRKHNSWLGKRTQPIISTGGSWCSS 309
           L+    G PA+ +  A   ++   R  + WL +RT P  S+G S  +S
Sbjct: 141 LSEFEIGTPASNSTEALISAVMAGRSISPWLARRTSPANSSGDSAIAS 188



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>IGF2_PIG (P23695) Insulin-like growth factor II precursor (IGF-II)|
          Length = 181

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 137 CCEASFAGWLVYCGGRLPDR*QFLC 63
           CC A++      CGG L D  QF+C
Sbjct: 21  CCYAAYRPSETLCGGELVDTLQFVC 45



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>PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 179 PRENRLQKTEMLLRSRSDATENTILGSAKGPNRSSPRGGLGARR 310
           P++ R+  + +L R  +  T  T++ S+  P+R  P  G+G  R
Sbjct: 12  PKKGRVCSSLLLERHPASGTLTTMVDSSAPPSRKRPGAGVGRPR 55



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>HQGT_RAUSE (Q9AR73) Hydroquinone glucosyltransferase (EC 2.4.1.218) (Arbutin|
           synthase)
          Length = 470

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 182 GECLLS*NWEVQMYVCCEASFAGWLVYCG 96
           G CLL  +W  Q  +    S  G+L +CG
Sbjct: 334 GRCLLVPSWAPQTEILSHGSTGGFLTHCG 362



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>IGF2_MUSVI (P41694) Insulin-like growth factor II precursor (IGF-II)|
           (Fragment)
          Length = 129

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 182 GECLLS*NWEVQMYVCCEASFAGWLVYCGGRLPDR*QFLC 63
           G+ LL+    + +  CC A++      CGG L D  QF+C
Sbjct: 6   GKSLLAPLTFLALASCCFAAYRPSETLCGGELVDTLQFVC 45



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>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)|
          Length = 585

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 26  SSSQLLYNYLGNSRETVICQVTSHRSTRASQQNWLHNKHTS 148
           S+  LL N LGN   ++I  + ++ +TR  Q+ W+ +   S
Sbjct: 510 SALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNS 550



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>IGF2_RAT (P01346) Insulin-like growth factor II precursor (IGF-II)|
           (Multiplication-stimulating polypeptide)
           (Multiplication-stimulating activity) (MSA)
          Length = 180

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 140 VCCEASFAGWLVYCGGRLPDR*QFLC 63
           +CC A++      CGG L D  QF+C
Sbjct: 20  LCCIAAYRPSETLCGGELVDTLQFVC 45



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>IGF2_SHEEP (P10764) Insulin-like growth factor II precursor (IGF-II)|
          Length = 179

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 137 CCEASFAGWLVYCGGRLPDR*QFLC 63
           CC A++      CGG L D  QF+C
Sbjct: 21  CCYAAYRPSETLCGGELVDTLQFVC 45



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>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin|
           matrix protein 1) (DMP-1)
          Length = 510

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +2

Query: 86  VTSHRSTRA-SQQNWLHNKHTSEPPSFNLTDIPRENRLQKTEMLLRSRSDATEN-TILGS 259
           V  +++T + S + W  +   +  P    ++   E++L   E      SD+TE+  +LG 
Sbjct: 19  VARYQNTESKSSEEWKGHLAQTPTPPLESSESSEESKLSSEEQANEDPSDSTESEEVLGL 78

Query: 260 AKGPNRSSPRGGLGAR 307
               +   P GGL  R
Sbjct: 79  DDQQHVHRPAGGLSRR 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,162,330
Number of Sequences: 219361
Number of extensions: 937905
Number of successful extensions: 2500
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2500
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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