Clone Name | rbastl14e08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome 14, complete sequence Length = 205044 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aaccccaaaaggtagcaaac 93 |||||||||||||||||||| Sbjct: 10535 aaccccaaaaggtagcaaac 10516
>gb|AE009186.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 212 of 256 of the complete sequence Length = 11420 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 acattccgtggcatcgagga 262 |||||||||||||||||||| Sbjct: 8725 acattccgtggcatcgagga 8706
>gb|AC091524.4| Homo sapiens BAC clone RP11-132L11 from 7, complete sequence Length = 69887 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ttttttctaatccacattcc 249 |||||||||||||||||||| Sbjct: 51916 ttttttctaatccacattcc 51935
>emb|AL513264.8| Human DNA sequence from clone RP11-480H3 on chromosome 6, complete sequence Length = 90015 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 14437 aataataataacatgcaaca 14418
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 acattccgtggcatcgagga 262 |||||||||||||||||||| Sbjct: 2356488 acattccgtggcatcgagga 2356469
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gggcggcaatattaacacctaaat 66 ||||||||||||||||||| |||| Sbjct: 1252854 gggcggcaatattaacaccgaaat 1252877
>gb|AC034150.6| Homo sapiens BAC clone RP11-167N19 from 4, complete sequence Length = 150167 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aattgtgcaaagcaaggaca 203 |||||||||||||||||||| Sbjct: 130313 aattgtgcaaagcaaggaca 130332
>gb|AC024159.4|AC024159 Homo sapiens chromosome 3 clone RP11-255K15 map 3p, complete sequence Length = 195544 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 9617 aataataataacatgcaaca 9636
>gb|AC026197.3|AC026197 Homo sapiens chromosome 3 clone RP11-483G20 map 3p, complete sequence Length = 202083 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 78556 aataataataacatgcaaca 78575
>gb|AC020755.3|AC020755 Homo sapiens chromosome 3 clone RP11-3D22 map 3p, complete sequence Length = 166076 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 43560 aataataataacatgcaaca 43579
>gb|AC025920.12|AC025920 Homo sapiens chromosome N/A clone RP11-277D17, complete sequence Length = 161489 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 138233 aataataataacatgcaaca 138252
>emb|BX000352.8| Mouse DNA sequence from clone RP23-472K10 on chromosome X, complete sequence Length = 102363 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gagtagtgtaataataataa 28 |||||||||||||||||||| Sbjct: 8095 gagtagtgtaataataataa 8076
>emb|CT025614.7| Mouse DNA sequence from clone RP23-418B18 on chromosome 13, complete sequence Length = 183907 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctaaactgagtagtgtaat 20 |||||||||||||||||||| Sbjct: 73551 gctaaactgagtagtgtaat 73532
>gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p, complete sequence Length = 173370 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aataataataacatgcaaca 37 |||||||||||||||||||| Sbjct: 97201 aataataataacatgcaaca 97220 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,777,620 Number of Sequences: 3902068 Number of extensions: 3777620 Number of successful extensions: 75728 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75684 Number of HSP's gapped (non-prelim): 44 length of query: 325 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 303 effective length of database: 17,147,199,772 effective search space: 5195601530916 effective search space used: 5195601530916 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)