Clone Name | rbastl14e07 |
---|---|
Clone Library Name | barley_pub |
>Y145_MYCPN (P75141) Hypothetical UPF0134 protein MPN145 (E07_orf179)| Length = 179 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -2 Query: 225 EEISSLHKRLKTLEGDRDFLEHSINSLKN 139 E + S+HKRL ++EG D +E+ ++ L++ Sbjct: 150 ESLGSIHKRLDSMEGRLDSMENRLDKLES 178
>IFC2_CAEEL (Q21067) Intermediate filament protein ifc-2 (Intermediate filament| protein C2) (IF-C2) (Cel IF C2) Length = 622 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 219 ISSLHKRLKTLEGDRDFLEHSINSLKNGKEGAQFVREIA 103 ++++ RL +EG FLE I+ LKN +E F +A Sbjct: 313 VTNVRSRLAEVEGRNFFLERLIDDLKNNEEAKFFEISLA 351
>DNJ49_ARATH (Q9FH28) Chaperone protein dnaJ 49 (AtJ49) (AtDjC49)| Length = 354 Score = 28.1 bits (61), Expect = 6.4 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -2 Query: 216 SSLHKRLKTLEGDRDFLEHSINSLKNGKEGAQFVREIACN 97 SS+ ++LKT++GD D LE +K +E VR I N Sbjct: 60 SSVSEKLKTMDGDDDKLE--TGKMKYTEENVDLVRNIIRN 97
>SMC_METJA (Q59037) Chromosome partition protein smc homolog| Length = 1169 Score = 28.1 bits (61), Expect = 6.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%) Frame = -2 Query: 225 EEISSLHKRLKTL----EGDRDFLEHSINSLK 142 EE+ LHK +K L E D+ L+ SIN LK Sbjct: 293 EEVLELHKSIKELEVEIENDKKVLDSSINELK 324
>NTP1_YMTV (Q9QB93) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside| triphosphate phosphohydrolase I) (NPH I) Length = 631 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 Query: 7 RNLVHKEVLCEELGSTMLFVVNGHGSEFSEVAGN 108 +NLV+++ L ++LG ++VN S F +V G+ Sbjct: 215 KNLVNEKELIDKLGGICSYIVNDEFSIFDDVEGS 248 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,690,093 Number of Sequences: 219361 Number of extensions: 518873 Number of successful extensions: 1507 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1507 length of database: 80,573,946 effective HSP length: 51 effective length of database: 69,386,535 effective search space used: 1665276840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)