>PYRB_BACTN (Q8A9S3) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate|
           transcarbamylase) (ATCase)
          Length = 313

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = -1

Query: 246 CRNDFPKFRKHTEQKGTTEDNIEKESLKHMILIRRGKLNLQVEYVSIRK*LLLPNVILQM 67
           C+    K+ +HTE    TE+ I    + +M  ++R +    +EY  ++   +L N +L+ 
Sbjct: 196 CKEHQIKYIEHTE---FTEEIIADADILYMTRVQRERFTDLMEYERVKNVYILRNKMLEN 252

Query: 66  TKLTVNILY 40
           T+  + IL+
Sbjct: 253 TRPNLRILH 261

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +2

Query: 110  LTYSTCKFNFPRLIRIICFRLSFSILSSV-VPFCSVCFLNLG 232
            LTY+  K NF R+ +I+ +++  +I+ ++ +   S+  LN+G
Sbjct: 1623 LTYTNNKLNFDRIFKIVIYKVGKTIIQNILIKSSSMNLLNIG 1664

>PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-)|
          Length = 671

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = -1

Query: 279 YAKVEGLVPERCRNDFPKFRKHTEQKGTTEDNIEKESLKHMI 154
           + K+E L P++ +  F +F  + + K + + N+E + +KH++
Sbjct: 183 HEKLENLTPKQLKEVFSQFLFNNQSKSSLKINLEYKVIKHLL 224

>YIF1A_BRARE (Q6PC24) Protein YIF1A (YIP1-interacting factor homolog A)|
          Length = 307

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 65  VICKITLGSNSYFLILTYSTCKFNFPRLIRIICFRLSFSILSSV 196
           V C +  GS+ Y++ L +S+C   F      I   L   ILSS+
Sbjct: 229 VFCGLLFGSDGYYVALAWSSCALMF-----FIVRSLKMKILSSI 267

>ULA1_SCHPO (Q9UT93) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1)
          Length = 500

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -1

Query: 282 QYAKVEGLVPERCRNDFPKFRKHTEQK----GTTEDNIEKESLKHMILIRRGKLNLQV 121
           QY K++ +  E+  ND  KF+K+ +Q       + + I    +KH     R  LN++V
Sbjct: 325 QYVKLQVIYKEKSENDILKFKKYVQQTLKRLNRSVEEITDLEIKH---FSRNCLNIKV 379

>CYAA_SACKL (P23466) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
           (Adenylyl cyclase)
          Length = 1839

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 288 RDQYAKVEGLVPERCRNDFPKFRKHTEQKGTTEDNIEKE 172
           R+++ ++E    E   N  PKF+KH     TT  N E +
Sbjct: 14  REKHPQIEETFEEHVHNAMPKFKKHYALGITTHTNDEDD 52

>PPCK_RHOPA (Q9ZNH4) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 537

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 288 RDQYAKVEGLVPERCRNDFPKFRKHTEQKGTTEDNI 181
           R + A++E  VPE    D P FR   ++ G   +N+
Sbjct: 143 RPERAELENFVPELTLIDLPSFRADPKRHGCRSENV 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,602,860
Number of Sequences: 219361
Number of extensions: 699049
Number of successful extensions: 1721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)