>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence
          Length = 174487

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 124   aaaaaacaatcattacaacaaaaagtt 150
             |||||||||| ||||||||||||||||
Sbjct: 13382 aaaaaacaataattacaacaaaaagtt 13408

>emb|CT030726.4| Mouse DNA sequence from clone RP24-465G11 on chromosome 13, complete
             sequence
          Length = 156720

 Score = 46.1 bits (23), Expect = 0.066
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 124   aaaaaacaatcattacaacaaaaagtt 150
             |||||||||| ||||||||||||||||
Sbjct: 28959 aaaaaacaataattacaacaaaaagtt 28933

>gb|AY109578.1| Zea mays CL1712_1 mRNA sequence
          Length = 3346

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 273  tctggaaagctaacttgtatatttcattgtatgtgtca 310
            ||||||||||||| |  ||||||||| |||||||||||
Sbjct: 2922 tctggaaagctaaatcatatatttcactgtatgtgtca 2885

>gb|U85495.1|ZMU85495 Zea mays LON2 protease (LON2) mRNA, complete cds
          Length = 3411

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 273  tctggaaagctaacttgtatatttcattgtatgtgtca 310
            ||||||||||||| |  ||||||||| |||||||||||
Sbjct: 2922 tctggaaagctaaatcatatatttcactgtatgtgtca 2885

>gb|AC003664.1|AC003664 Homo sapiens chromosome 17, clone hCIT54K19, complete sequence
          Length = 202233

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 165    aaagaatggcctagctgcaaac 186
              ||||||||||||||||||||||
Sbjct: 162485 aaagaatggcctagctgcaaac 162464

>ref|XM_632541.1| Dictyostelium discoideum hypothetical protein (DDB0187106), partial
           mRNA
          Length = 2991

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 128 aacaatcattacaacaaaaag 148
           |||||||||||||||||||||
Sbjct: 662 aacaatcattacaacaaaaag 682

>emb|Z97832.11|HS329A5 Human DNA sequence from clone RP3-329A5 on chromosome 6p21.1-21.33
              Contains the gene for a novel EGF-like and CUB domain
              protein similar to mouse CUB domain EGF-like signal peptide
              1 (Scube1) and mouse and human CEGP1, the ZNF76 gene for
              zinc finger protein 76 (expressed in testis), the DEF6 gene
              for differentially expressed in FDCP 6 homolog (mouse), a
              ribosomal protein L35A (RPL35A) pseudogene and three CpG
              islands, complete sequence
          Length = 117026

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 129    acaatcattacaacaaaaagttact 153
              ||||| |||||||||||||||||||
Sbjct: 110235 acaattattacaacaaaaagttact 110211

>gb|AC104637.5| Homo sapiens 3 BAC RP11-387L24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 99960

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   acaatcattacaacaaaaagt 149
             |||||||||||||||||||||
Sbjct: 93599 acaatcattacaacaaaaagt 93619

>gb|AY692274.1| Borrelia turicatae P-553 gene, complete cds
          Length = 2127

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 aaaaaacaatcattacaacaa 144
           |||||||||||||||||||||
Sbjct: 573 aaaaaacaatcattacaacaa 593

>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
           complete sequence
          Length = 69411

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  attctcgtcaaaatttcctta 97
           |||||||||||||||||||||
Sbjct: 639 attctcgtcaaaatttcctta 659

>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete
              sequence
          Length = 250195

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaaaacaatcattacaacaa 144
              ||||||||||||||||||||
Sbjct: 213590 aaaaacaatcattacaacaa 213571



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaaaacaatcattacaacaa 144
              ||||||||||||||||||||
Sbjct: 213566 aaaaacaatcattacaacaa 213547



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaaaacaatcattacaacaa 144
              ||||||||||||||||||||
Sbjct: 213542 aaaaacaatcattacaacaa 213523

>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence
          Length = 152106

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    tcaaaatttccttaaacata 103
             ||||||||||||||||||||
Sbjct: 64101 tcaaaatttccttaaacata 64120

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 126     aaaacaatcattacaacaaa 145
               ||||||||||||||||||||
Sbjct: 3579008 aaaacaatcattacaacaaa 3578989

>emb|AL591468.4| Human DNA sequence from clone RP11-10J5 on chromosome 6 Contains a
             novel gene and the 5' part of a novel gene, complete
             sequence
          Length = 55261

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ttgtatatttcattgtatgt 306
             ||||||||||||||||||||
Sbjct: 13184 ttgtatatttcattgtatgt 13203

>emb|AL365230.8| Human DNA sequence from clone RP11-384G23 on chromosome 13, complete
             sequence
          Length = 99257

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   atatttcattgtatgtgtca 310
             ||||||||||||||||||||
Sbjct: 10748 atatttcattgtatgtgtca 10767

>emb|X64659.1|CJINTERFG C.jacchus interferon gene for interferon gamma
          Length = 8527

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  taacttgtatatttcattgt 302
            ||||||||||||||||||||
Sbjct: 2783 taacttgtatatttcattgt 2764

>gb|AC026979.9| Homo sapiens, clone RP11-51J9, complete sequence
          Length = 130318

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    ttgtatatttcattgtatgt 306
              ||||||||||||||||||||
Sbjct: 110326 ttgtatatttcattgtatgt 110345

>gb|AC090820.6| Homo sapiens chromosome 8, clone CTD-2345M20, complete sequence
          Length = 138021

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ttgtatatttcattgtatgt 306
             ||||||||||||||||||||
Sbjct: 27939 ttgtatatttcattgtatgt 27958

>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence
          Length = 165319

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   caatcattacaacaaaaagt 149
             ||||||||||||||||||||
Sbjct: 33698 caatcattacaacaaaaagt 33717

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 252      gctagcttgtttctgtctca 271
                ||||||||||||||||||||
Sbjct: 29235600 gctagcttgtttctgtctca 29235619

>gb|AC012352.7| Homo sapiens BAC clone RP11-12M21 from 2, complete sequence
          Length = 168142

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   atcttgcaaagaatggccta 177
             ||||||||||||||||||||
Sbjct: 13355 atcttgcaaagaatggccta 13336

>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gctagcttgtttctgtctca 271
             ||||||||||||||||||||
Sbjct: 24289 gctagcttgtttctgtctca 24308

>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1165_F02
          Length = 125993

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gctagcttgtttctgtctca 271
             ||||||||||||||||||||
Sbjct: 75674 gctagcttgtttctgtctca 75693

>gb|AC155159.2| Mus musculus BAC clone RP24-482D1 from 18, complete sequence
          Length = 190752

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    tgtttctgtctcattctgga 278
              ||||||||||||||||||||
Sbjct: 106025 tgtttctgtctcattctgga 106044

>emb|BX323850.16| Zebrafish DNA sequence from clone DKEY-156A5 in linkage group 11,
              complete sequence
          Length = 156989

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      cttttttgggtttgaacaaa 26
              ||||||||||||||||||||
Sbjct: 145274 cttttttgggtttgaacaaa 145293

>gb|AC130103.4| Rattus norvegicus  BAC CH230-41L20 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 224716

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    gaaagctaacttgtatattt 296
              ||||||||||||||||||||
Sbjct: 133349 gaaagctaacttgtatattt 133330

>emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1-72b19, COMPLETE SEQUENCE
          Length = 121254

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   aaaaaacaatcattacaacaaaaa 147
             |||||||||| |||||||||||||
Sbjct: 51953 aaaaaacaataattacaacaaaaa 51976


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,607,563
Number of Sequences: 3902068
Number of extensions: 3607563
Number of successful extensions: 73749
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73632
Number of HSP's gapped (non-prelim): 114
length of query: 310
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 288
effective length of database: 17,147,199,772
effective search space: 4938393534336
effective search space used: 4938393534336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)