>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 323    acttcattggctggctggctgg 344
              ||||||||||||||||||||||
Sbjct: 188998 acttcattggctggctggctgg 188977

>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence
          Length = 203829

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    taacgctagctagcaagatagt 45
             ||||||||||||||||||||||
Sbjct: 37032 taacgctagctagcaagatagt 37053

>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 323   acttcattggctggctggctgg 344
             ||||||||||||||||||||||
Sbjct: 18232 acttcattggctggctggctgg 18253

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 44       gtagataaatatttacatcag 64
                |||||||||||||||||||||
Sbjct: 40693065 gtagataaatatttacatcag 40693045

>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     gtagataaatatttacatcag 64
              |||||||||||||||||||||
Sbjct: 135043 gtagataaatatttacatcag 135023

>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
            insert sequence
          Length = 3151

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   gtagataaatatttacatcag 64
            |||||||||||||||||||||
Sbjct: 2943 gtagataaatatttacatcag 2923

>gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8cen, complete sequence
          Length = 82674

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tcttaactgccaagagcaag 158
             ||||||||||||||||||||
Sbjct: 21677 tcttaactgccaagagcaag 21696

>gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 120628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  ggctggctggctgggacccg 350
            ||||||||||||||||||||
Sbjct: 4560 ggctggctggctgggacccg 4579

>gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, complete sequence
          Length = 82676

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tcttaactgccaagagcaag 158
             ||||||||||||||||||||
Sbjct: 21678 tcttaactgccaagagcaag 21697

>gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, complete sequence
          Length = 183978

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    tcttaactgccaagagcaag 158
              ||||||||||||||||||||
Sbjct: 174439 tcttaactgccaagagcaag 174420

>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
              gene, partial cds; and RST and OAT4 genes, complete cds,
              complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ggctggctggctgggacccg 350
              ||||||||||||||||||||
Sbjct: 115106 ggctggctggctgggacccg 115125

>gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosome 5, complete sequence
          Length = 225445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   atcaccaaaagacatcagga 319
             ||||||||||||||||||||
Sbjct: 39119 atcaccaaaagacatcagga 39100

>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
             sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   ggctggctggctgggacccg 350
             ||||||||||||||||||||
Sbjct: 45822 ggctggctggctgggacccg 45803

>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
             sequence
          Length = 169259

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   ggctggctggctgggacccg 350
             ||||||||||||||||||||
Sbjct: 84977 ggctggctggctgggacccg 84958

>emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chromosome X, complete
              sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    gccaagagcaagcaaaccag 166
              ||||||||||||||||||||
Sbjct: 207832 gccaagagcaagcaaaccag 207851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,786,843
Number of Sequences: 3902068
Number of extensions: 2786843
Number of successful extensions: 65657
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65616
Number of HSP's gapped (non-prelim): 41
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)