Clone Name | rbastl14c10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in... | 40 | 2.9 | 2 | emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chr... | 40 | 2.9 | 3 | emb|AL662876.23| Mouse DNA sequence from clone RP23-288K19 on ch... | 40 | 2.9 | 4 | emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in... | 40 | 2.9 |
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>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13, complete sequence Length = 209449 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tatgtagctggccaaaaaga 155 |||||||||||||||||||| Sbjct: 158837 tatgtagctggccaaaaaga 158818
>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the 3' end of the SLC25A24 gene for solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24 and two CpG islands, complete sequence Length = 183037 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcagtagttcatggcaaaag 130 |||||||||||||||||||| Sbjct: 82034 tcagtagttcatggcaaaag 82015
>emb|AL662876.23| Mouse DNA sequence from clone RP23-288K19 on chromosome 11 Contains the 5' end of a novel gene, a pseudogene similar to human polymerase (RNA) II (DNA directed) polypeptide D POLR2D, two novel genes, the Xbp1 gene for X-box binding protein 1, the gene for a novel ankyrin repeat containing protein and three CpG islands, complete sequence Length = 232225 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcaacaaagtagctcagtag 117 |||||||||||||||||||| Sbjct: 127131 gcaacaaagtagctcagtag 127150
>emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in linkage group 13, complete sequence Length = 216185 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tatgtagctggccaaaaaga 155 |||||||||||||||||||| Sbjct: 39222 tatgtagctggccaaaaaga 39203 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,446,868 Number of Sequences: 3902068 Number of extensions: 1446868 Number of successful extensions: 103980 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103973 Number of HSP's gapped (non-prelim): 7 length of query: 226 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 204 effective length of database: 17,147,199,772 effective search space: 3498028753488 effective search space used: 3498028753488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)