>emb|AL358133.11| Human DNA sequence from clone RP11-810I22 on chromosome 6 Contains the
             3' end of a novel gene (CD001, BM-021, FLJ11240), complete
             sequence
          Length = 91859

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   agctaaattttacaggctgctt 352
             ||||||||||||||||||||||
Sbjct: 29739 agctaaattttacaggctgctt 29760

>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence
          Length = 220216

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   agctaaattttacaggctgctt 352
             ||||||||||||||||||||||
Sbjct: 42744 agctaaattttacaggctgctt 42765

>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence
          Length = 202938

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 278    aaagagggaaaagaaactaga 298
              |||||||||||||||||||||
Sbjct: 137742 aaagagggaaaagaaactaga 137762

>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   aaagagggaaaagaaactaga 298
             |||||||||||||||||||||
Sbjct: 22178 aaagagggaaaagaaactaga 22198

>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
             Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 331   agctaaattttacaggctgct 351
             |||||||||||||||||||||
Sbjct: 99605 agctaaattttacaggctgct 99625

>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
          Length = 192861

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    aaagaaaacaagagagctaaa 337
              |||||||||||||||||||||
Sbjct: 115622 aaagaaaacaagagagctaaa 115642

>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone  F17I5 (ESSA project)
          Length = 86748

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 317   aaagaaaacaagagagctaaa 337
             |||||||||||||||||||||
Sbjct: 66598 aaagaaaacaagagagctaaa 66618

>gb|AC136188.2| Homo sapiens 12 BAC RP11-633L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70901

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 331   agctaaattttacaggctgct 351
             |||||||||||||||||||||
Sbjct: 28083 agctaaattttacaggctgct 28063

>dbj|AP000783.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-12D18, complete
              sequence
          Length = 114233

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 331    agctaaattttacaggctgct 351
              |||||||||||||||||||||
Sbjct: 102383 agctaaattttacaggctgct 102403

>ref|XM_637135.1| Dictyostelium discoideum hypothetical protein (DDB0204528), partial
           mRNA
          Length = 1314

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  tcactaatattattattaat 29
           ||||||||||||||||||||
Sbjct: 485 tcactaatattattattaat 466

>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence
          Length = 235287

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aaatacaacccacagccatc 207
             ||||||||||||||||||||
Sbjct: 31574 aaatacaacccacagccatc 31555

>gb|AY815966.1| Schistosoma japonicum SJCHGC04950 protein mRNA, complete cds
          Length = 927

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   ttcactaatattattattaa 28
           ||||||||||||||||||||
Sbjct: 447 ttcactaatattattattaa 428

>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     gacattattgccagattttt 114
              ||||||||||||||||||||
Sbjct: 677146 gacattattgccagattttt 677165

>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     gacattattgccagattttt 114
              ||||||||||||||||||||
Sbjct: 653932 gacattattgccagattttt 653951

>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   aaagaaaacaagagagctaa 336
             ||||||||||||||||||||
Sbjct: 52169 aaagaaaacaagagagctaa 52188

>emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chromosome 6 Contains the
              PKIB gene for protein kinase (cAMP-dependent, catalytic)
              inhibitor beta (protein kinase, cAMP-dependent, catalytic,
              inhibitor 2 (PRKACN2)) (similar to FLJ23817). Contains a
              CpG island, complete sequence
          Length = 153677

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    atctgtaagctaaaagaggg 285
              ||||||||||||||||||||
Sbjct: 116787 atctgtaagctaaaagaggg 116768

>emb|AL391601.6| Human DNA sequence from clone RP11-551D9 on chromosome 13, complete
              sequence
          Length = 145871

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ttcactaatattattattaatcca 32
              |||||||||||| |||||||||||
Sbjct: 124225 ttcactaatattgttattaatcca 124202

>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
             sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    taatattattattaatccaa 33
             ||||||||||||||||||||
Sbjct: 42227 taatattattattaatccaa 42246

>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence
          Length = 173135

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     ttattaatccaagcgcaccaaaat 45
              ||||||||||||| ||||||||||
Sbjct: 112739 ttattaatccaagggcaccaaaat 112762

>gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete sequence
          Length = 189507

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    gaaaatacaacccacagcca 205
              ||||||||||||||||||||
Sbjct: 106102 gaaaatacaacccacagcca 106083

>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     taatattattattaatccaa 33
              ||||||||||||||||||||
Sbjct: 125354 taatattattattaatccaa 125335

>emb|BX324128.14| Zebrafish DNA sequence from clone DKEY-181O6 in linkage group 19,
             complete sequence
          Length = 139695

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aatattattattaatccaag 34
             ||||||||||||||||||||
Sbjct: 33487 aatattattattaatccaag 33468

>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     gacattattgccagattttt 114
              ||||||||||||||||||||
Sbjct: 640015 gacattattgccagattttt 640034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,254,390
Number of Sequences: 3902068
Number of extensions: 5254390
Number of successful extensions: 104310
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104258
Number of HSP's gapped (non-prelim): 52
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)