>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 168     gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
               |||||||||||||||| |||||||| || ||| || | ||||||||||| ||| ||||||
Sbjct: 8827144 gctaggctcgccctacaggagatagcggcggccggtgtggcacatagcttgcctgagctc 8827203

                      
Query: 228     taccttg 234
               |||||||
Sbjct: 8827204 taccttg 8827210



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 319     agggctcctcccgtgaagcatcactatacacatagc 354
               ||||| ||| ||||||||||||||||||||||||||
Sbjct: 8827295 agggcgcctgccgtgaagcatcactatacacatagc 8827330



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 13      ctaaagccagttccataagattcatcac 40
               ||||||||  ||||||||||||||||||
Sbjct: 8827006 ctaaagccgattccataagattcatcac 8827033

>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
             complete sequence
          Length = 126027

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 168   gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
             |||||||||||||||| |||||||| || ||| || | ||||||||||| ||| ||||||
Sbjct: 18032 gctaggctcgccctacaggagatagcggcggccggtgtggcacatagcttgcctgagctc 18091

                    
Query: 228   taccttg 234
             |||||||
Sbjct: 18092 taccttg 18098



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 319   agggctcctcccgtgaagcatcactatacacatagc 354
             ||||| ||| ||||||||||||||||||||||||||
Sbjct: 18183 agggcgcctgccgtgaagcatcactatacacatagc 18218



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 13    ctaaagccagttccataagattcatcac 40
             ||||||||  ||||||||||||||||||
Sbjct: 17894 ctaaagccgattccataagattcatcac 17921

>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
             complete sequence
          Length = 112265

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 168   gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
             |||||||||||||||| |||||||| || ||| || | ||||||||||| ||| ||||||
Sbjct: 70297 gctaggctcgccctacaggagatagcggcggccggtgtggcacatagcttgcctgagctc 70356

                    
Query: 228   taccttg 234
             |||||||
Sbjct: 70357 taccttg 70363



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 319   agggctcctcccgtgaagcatcactatacacatagc 354
             ||||| ||| ||||||||||||||||||||||||||
Sbjct: 70448 agggcgcctgccgtgaagcatcactatacacatagc 70483



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 13    ctaaagccagttccataagattcatcac 40
             ||||||||  ||||||||||||||||||
Sbjct: 70159 ctaaagccgattccataagattcatcac 70186

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 168     gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
               |||||||||||||||| |||||||| || ||| || | ||||||||||| ||| ||||||
Sbjct: 8824979 gctaggctcgccctacaggagatagcggcggccggtgtggcacatagcttgcctgagctc 8825038

                      
Query: 228     taccttg 234
               |||||||
Sbjct: 8825039 taccttg 8825045



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 319     agggctcctcccgtgaagcatcactatacacatagc 354
               ||||| ||| ||||||||||||||||||||||||||
Sbjct: 8825130 agggcgcctgccgtgaagcatcactatacacatagc 8825165



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 13      ctaaagccagttccataagattcatcac 40
               ||||||||  ||||||||||||||||||
Sbjct: 8824841 ctaaagccgattccataagattcatcac 8824868

>dbj|AK072790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142F14, full
            insert sequence
          Length = 3227

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 168  gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
            |||||||||||||||| |||||||| || ||| || | ||||||||||| ||| ||||||
Sbjct: 3002 gctaggctcgccctacaggagatagcggcggccggtgtggcacatagcttgcctgagctc 2943

                   
Query: 228  taccttg 234
            |||||||
Sbjct: 2942 taccttg 2936



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 319  agggctcctcccgtgaagcatcactatacacatagc 354
            ||||| ||| ||||||||||||||||||||||||||
Sbjct: 2851 agggcgcctgccgtgaagcatcactatacacatagc 2816



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 13   ctaaagccagttccataagattcatcac 40
            ||||||||  ||||||||||||||||||
Sbjct: 3140 ctaaagccgattccataagattcatcac 3113

>gb|AY105225.1| Zea mays PCO140761 mRNA sequence
          Length = 1100

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 168 gctaggctcgccctacgggagatagaggtggctggcgcggcacatagctggccggagctc 227
           |||||||||| || || ||||| ||||||||  || | ||||||||||||| ||||||||
Sbjct: 799 gctaggctcggcccacaggagaaagaggtggacggtggggcacatagctggtcggagctc 740

                  
Query: 228 taccttg 234
           | |||||
Sbjct: 739 ttccttg 733

>emb|X96722.1|SCCHXIVL S.cerevisiae DNA region from chromosome XIV, left arm
          Length = 33016

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 106   aagagaaaaggaacgaaaagaaa 128
             |||||||||||||||||||||||
Sbjct: 13043 aagagaaaaggaacgaaaagaaa 13065

>emb|Z71531.1|SCYNL255C S.cerevisiae chromosome XIV reading frame ORF YNL255c
          Length = 945

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 aagagaaaaggaacgaaaagaaa 128
           |||||||||||||||||||||||
Sbjct: 823 aagagaaaaggaacgaaaagaaa 845

>emb|Z71530.1|SCYNL254C S.cerevisiae chromosome XIV reading frame ORF YNL254c
          Length = 2227

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 aagagaaaaggaacgaaaagaaa 128
           |||||||||||||||||||||||
Sbjct: 130 aagagaaaaggaacgaaaagaaa 152

>emb|AL671005.7| Mouse DNA sequence from clone RP23-76J17 on chromosome 4 Contains the
             Zdhhc21 gene for zinc finger and DHHC domain containing
             protein 21 and a CpG island, complete sequence
          Length = 202374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   aagagaaaaggaacgaaaagaaaca 130
             ||||||||||||| |||||||||||
Sbjct: 75628 aagagaaaaggaaggaaaagaaaca 75604

>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 99     aaagtacaagagaaaaggaacgaaa 123
              ||||||||||||||||| |||||||
Sbjct: 527919 aaagtacaagagaaaagtaacgaaa 527895

>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    acaagagaaaaggaacgaaaagaaa 128
              ||||||||||||||| |||||||||
Sbjct: 112609 acaagagaaaaggaaagaaaagaaa 112585

>ref|XM_669696.1| Plasmodium berghei strain ANKA hypothetical protein (PB000411.00.0)
            partial mRNA
          Length = 2489

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   ttccataagattcatcactt 42
            ||||||||||||||||||||
Sbjct: 1382 ttccataagattcatcactt 1363

>emb|AL355979.11| Human DNA sequence from clone RP11-466G24 on chromosome 10 Contains the
             5' end of the gene for Rho-GTPase activating protein 10
             (ARHGAP10) and a CpG island, complete sequence
          Length = 106623

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   aagagaaaaggaacgaaaagaaac 129
             ||||||||||||| ||||||||||
Sbjct: 60379 aagagaaaaggaaagaaaagaaac 60356

>gb|AC113054.14| Mus musculus chromosome 15, clone RP23-251L21, complete sequence
          Length = 179314

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   aagagaaaaggaacgaaaagaaac 129
             ||||||||||||| ||||||||||
Sbjct: 81940 aagagaaaaggaaagaaaagaaac 81917

>gb|AC084855.4| Homo sapiens chromosome 15, clone CTD-3076O17, complete sequence
          Length = 180944

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aaagtacaagagaaaaggaa 118
             ||||||||||||||||||||
Sbjct: 30863 aaagtacaagagaaaaggaa 30882

>gb|AC090825.5| Homo sapiens chromosome 15, clone CTD-2054N24, complete sequence
          Length = 170507

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     aaagtacaagagaaaaggaa 118
              ||||||||||||||||||||
Sbjct: 168284 aaagtacaagagaaaaggaa 168303

>gb|AC021955.11| Homo sapiens chromosome 8, clone RP11-238G17, complete sequence
          Length = 192139

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   aggaacgaaaagaaacacatcatt 137
             ||||| ||||||||||||||||||
Sbjct: 55531 aggaaggaaaagaaacacatcatt 55554

>gb|AC015468.5|AC015468 Homo sapiens chromosome 8, clone RP11-369E15, complete sequence
          Length = 189662

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   aggaacgaaaagaaacacatcatt 137
             ||||| ||||||||||||||||||
Sbjct: 13347 aggaaggaaaagaaacacatcatt 13324

>gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177503

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    atactggcccagcagcactg 95
             ||||||||||||||||||||
Sbjct: 86747 atactggcccagcagcactg 86766

>gb|AC112670.11| Mus musculus chromosome 7, clone RP24-298H10, complete sequence
          Length = 161683

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   aagagaaaaggaacgaaaagaaac 129
             ||||||||||||| ||||||||||
Sbjct: 77467 aagagaaaaggaaagaaaagaaac 77444

>emb|CT476826.2| Pan troglodytes chromosome X BAC RP43-034A07, complete sequence,
            whole genome shotgun sequence
          Length = 151456

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   atactggcccagcagcactg 95
            ||||||||||||||||||||
Sbjct: 9410 atactggcccagcagcactg 9391

>emb|AL732487.10| Mouse DNA sequence from clone RP23-188N15 on chromosome X, complete
             sequence
          Length = 173929

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gaaacacatcattttcaatt 144
             ||||||||||||||||||||
Sbjct: 60910 gaaacacatcattttcaatt 60891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,880,174
Number of Sequences: 3902068
Number of extensions: 2880174
Number of successful extensions: 58575
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58478
Number of HSP's gapped (non-prelim): 97
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)