ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-al... 30 1.6
2FACE2_HUMAN (Q9Y256) CAAX prenyl protease 2 (EC 3.4.22.-) (Preny... 29 3.6
3FACE2_MOUSE (P57791) CAAX prenyl protease 2 (EC 3.4.22.-) (Preny... 28 8.1

>AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 434

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
 Frame = -1

Query: 250 GAPESNQAWNKHKICCVAECYDPYGSGRASASPPKDTAH----PHMNNKCTNEL 101
           G P+S   W  H IC      DPYG G  +     D A      H+N +   EL
Sbjct: 141 GTPDSRLDWGPHMIC----RDDPYGDGTGNPDTGADFAAAPDIDHLNKRVQREL 190



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>FACE2_HUMAN (Q9Y256) CAAX prenyl protease 2 (EC 3.4.22.-) (Prenyl|
           protein-specific endoprotease 2) (Farnesylated
           proteins-converting enzyme 2) (FACE-2) (hRCE1)
          Length = 329

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 82  GECTNVTIH--LYICCSYEGELYLWAVRLRLDH 174
           G C  V++   L + CSY G LY+W   L  DH
Sbjct: 32  GLCCWVSVFSCLSLACSYVGSLYVWKSELPRDH 64



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>FACE2_MOUSE (P57791) CAAX prenyl protease 2 (EC 3.4.22.-) (Prenyl|
           protein-specific endoprotease 2) (Farnesylated
           proteins-converting enzyme 2) (FACE-2)
          Length = 329

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 115 ICCSYEGELYLWAVRLRLDH 174
           + CSY G LY+W   L  DH
Sbjct: 45  LACSYVGSLYVWKSELPRDH 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,540,658
Number of Sequences: 219361
Number of extensions: 756995
Number of successful extensions: 1570
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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