>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 7e-23
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                           
Query: 123     ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 182
               ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 1633178 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 1633237

                                                                           
Query: 183     ggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttct 242
               | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 1633238 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 1633297

                         
Query: 243     ggtgcacctc 252
               ||||||||||
Sbjct: 1633298 ggtgcacctc 1633307

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score =  115 bits (58), Expect = 7e-23
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 123   ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 182
             ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 40624 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 40683

                                                                         
Query: 183   ggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttct 242
             | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 40684 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 40743

                       
Query: 243   ggtgcacctc 252
             ||||||||||
Sbjct: 40744 ggtgcacctc 40753

>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score =  115 bits (58), Expect = 7e-23
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                          
Query: 123    ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 182
              ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 112739 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 112798

                                                                          
Query: 183    ggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttct 242
              | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 112799 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 112858

                        
Query: 243    ggtgcacctc 252
              ||||||||||
Sbjct: 112859 ggtgcacctc 112868

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 7e-23
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                           
Query: 123     ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 182
               ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 1633176 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 1633235

                                                                           
Query: 183     ggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttct 242
               | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 1633236 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 1633295

                         
Query: 243     ggtgcacctc 252
               ||||||||||
Sbjct: 1633296 ggtgcacctc 1633305

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score =  115 bits (58), Expect = 7e-23
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 123   ttcatatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatat 182
             ||||||| |||||||| || | |||||||||||||||||||||||| ||||| |||||||
Sbjct: 45641 ttcatatcagggtgagttgcaactttgggcggtgaggctgaggctcaaccacctccatat 45700

                                                                         
Query: 183   ggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttct 242
             | ||||||||  ||||||  ||||| || || | |||||| || |||||||||||| |||
Sbjct: 45701 gaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggttactctct 45760

                       
Query: 243   ggtgcacctc 252
             ||||||||||
Sbjct: 45761 ggtgcacctc 45770

>gb|AY110419.1| Zea mays CL19897_1 mRNA sequence
          Length = 712

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 110/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 125 catatgagggtgagctgtatctttgggcggtgaggctgaggctcgaccacttccatatgg 184
           ||||| |||||||| || | ||||||||| ||||||||||| || || || |||||||| 
Sbjct: 271 catatcagggtgagttgcagctttgggcgatgaggctgaggttcaacaacctccatatga 330

                                                                       
Query: 185 atcataacactctgcaacacagcatatcttatgtttgttccaggcttggttactttctgg 244
           ||| | ||| |||| |  | |||||| || ||||||||||| |||||||||||| |||||
Sbjct: 331 atcctgacagtctggaggatagcatagctgatgtttgttccgggcttggttactctctgg 390

                      
Query: 245 tgcacctcgtc 255
           |||||||||||
Sbjct: 391 tgcacctcgtc 401

>ref|XM_493810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2727

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 176  tccatatggatcataacactctgcaacacagcatatcttatgtttgttccaggcttggtt 235
            |||||||| ||||||||  ||||||  ||||| || || | |||||| || |||||||||
Sbjct: 2642 tccatatgaatcataacggtctgcaggacagcgtaactgacgtttgtcccgggcttggtt 2583

                             
Query: 236  actttctggtgcacctc 252
            ||| |||||||||||||
Sbjct: 2582 actctctggtgcacctc 2566

>gb|AC078923.12| Homo sapiens 12 BAC RP11-699I16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152805

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 32    atttgttgaattgaagaatggac 54
             |||||||||||||||||||||||
Sbjct: 25994 atttgttgaattgaagaatggac 25972

>gb|AC018898.17| Homo sapiens 3 BAC RP11-178K17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   ttccaggcttggttactttct 242
             |||||||||||||||||||||
Sbjct: 36496 ttccaggcttggttactttct 36516

>gb|AC117521.2| Homo sapiens chromosome 5 clone RP11-1015H3, complete sequence
          Length = 171405

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    aaaatttgttgaattgaagaa 49
             |||||||||||||||||||||
Sbjct: 81595 aaaatttgttgaattgaagaa 81615

>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    aaatttgttgaattgaagaat 50
             |||||||||||||||||||||
Sbjct: 45611 aaatttgttgaattgaagaat 45631

>ref|XM_938750.1| PREDICTED: Homo sapiens KIAA0825 protein (KIAA0825), mRNA
          Length = 1863

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 aaaatttgttgaattgaagaa 49
          |||||||||||||||||||||
Sbjct: 9  aaaatttgttgaattgaagaa 29

>ref|XM_371761.3| PREDICTED: Homo sapiens similar to KIAA0825 protein (LOC642488),
          mRNA
          Length = 1863

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 aaaatttgttgaattgaagaa 49
          |||||||||||||||||||||
Sbjct: 9  aaaatttgttgaattgaagaa 29

>gb|AC010448.7| Homo sapiens chromosome 5 clone CTD-2237D2, complete sequence
          Length = 140090

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     aaaatttgttgaattgaagaa 49
              |||||||||||||||||||||
Sbjct: 110562 aaaatttgttgaattgaagaa 110542

>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     aaatttgttgaattgaagaat 50
              |||||||||||||||||||||
Sbjct: 189054 aaatttgttgaattgaagaat 189034

>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence
          Length = 170376

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     aaatttgttgaattgaagaat 50
              |||||||||||||||||||||
Sbjct: 127196 aaatttgttgaattgaagaat 127176

>gb|AC010283.5|AC010283 Homo sapiens chromosome 5 clone CTC-555J2, complete sequence
          Length = 157896

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     aaaatttgttgaattgaagaa 49
              |||||||||||||||||||||
Sbjct: 131151 aaaatttgttgaattgaagaa 131131

>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence
          Length = 186742

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    atcataaaatcaccaaaattt 35
             |||||||||||||||||||||
Sbjct: 70944 atcataaaatcaccaaaattt 70964

>ref|XM_632452.1| Dictyostelium discoideum hypothetical protein (DDB0187019), partial
            mRNA
          Length = 2169

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   aatatcataaaatcaccaaa 31
            ||||||||||||||||||||
Sbjct: 2083 aatatcataaaatcaccaaa 2102

>gb|AC087865.8| Homo sapiens 12 BAC RP11-66D24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 169045

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 32   atttgttgaattgaagaatggaccctgg 59
            |||||||||||| ||||||| |||||||
Sbjct: 8108 atttgttgaattaaagaatgaaccctgg 8135

>gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166857

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ccaaaatttgttgaattgaa 46
              ||||||||||||||||||||
Sbjct: 104966 ccaaaatttgttgaattgaa 104985

>gb|AC091516.8| Homo sapiens 12q BAC RP11-474L23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158998

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 32     atttgttgaattgaagaatggaccctgg 59
              |||||||||||| ||||||| |||||||
Sbjct: 133862 atttgttgaattaaagaatgaaccctgg 133835

>emb|BX005061.9| Zebrafish DNA sequence from clone CH211-158F5 in linkage group 5,
              complete sequence
          Length = 155854

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 93     taatgttacaattcatttgtacatttgt 120
              ||||||||||||| ||||||| ||||||
Sbjct: 129773 taatgttacaatttatttgtagatttgt 129746

>gb|AC109638.2| Homo sapiens BAC clone RP11-495B16 from 2, complete sequence
          Length = 104787

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aaaaagggtgaatgcactaa 95
             ||||||||||||||||||||
Sbjct: 58737 aaaaagggtgaatgcactaa 58756

>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete
              sequence
          Length = 285158

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ccaaaatttgttgaattgaa 46
              ||||||||||||||||||||
Sbjct: 111085 ccaaaatttgttgaattgaa 111066

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      aaaatttgttgaattgaaga 48
               ||||||||||||||||||||
Sbjct: 1814260 aaaatttgttgaattgaaga 1814241

>emb|X02497.1|DMCHORSG D.melanogaster chorion genes s18-1, s15-1 and s19-1
          Length = 4797

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   ccaaaatttgttgaattgaa 46
            ||||||||||||||||||||
Sbjct: 1934 ccaaaatttgttgaattgaa 1915

>emb|X06257.1|DMS18S15 Drosophila chorion genes s18-1 and s15-1
          Length = 3850

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   ccaaaatttgttgaattgaa 46
            ||||||||||||||||||||
Sbjct: 2793 ccaaaatttgttgaattgaa 2774


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,505,344
Number of Sequences: 3902068
Number of extensions: 3505344
Number of successful extensions: 76210
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76119
Number of HSP's gapped (non-prelim): 91
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)