ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAC7_YEAST (P17121) GTPase-activating protein SAC7 29 2.4
2C1R_PONPY (Q5R544) Complement C1r subcomponent precursor (EC 3.4... 28 4.1
3SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor 28 4.1
4AUR1_YEAST (P36107) Aureobasidin A resistance protein 28 4.1
5Y2535_VIBVY (Q7MII1) UPF0294 protein VV2535 28 4.1
6AUR1_CANAL (O13332) Aureobasidin A resistance protein homolog 28 5.4
7PURA_BRAJA (Q89EM1) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 27 9.2

>SAC7_YEAST (P17121) GTPase-activating protein SAC7|
          Length = 654

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +1

Query: 58  TITTGTKHLT----SCLSLYAGHTQFGILDGSSQTTIFKLQYHAVLSSTQTTLNP 210
           T++  TK LT      LSL+A  +QF ++ G +   IF+    ++LS  Q  ++P
Sbjct: 321 TLSNDTKQLTIYLLDLLSLFARQSQFNLMSGRNLAAIFQ---PSILSHPQHDMDP 372



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>C1R_PONPY (Q5R544) Complement C1r subcomponent precursor (EC 3.4.21.41)|
           (Complement component 1, r subcomponent) [Contains:
           Complement C1r subcomponent heavy chain; Complement C1r
           subcomponent light chain]
          Length = 705

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 147 LRRPI*NSELCMTCIQAQARC*VFSSRCYCSGY 49
           +R P+ N + C T ++ + R  VFS   +C+G+
Sbjct: 610 VRLPVANPQACETWLRGKNRMDVFSQNMFCAGH 642



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>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor|
          Length = 2177

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = +1

Query: 1   NNTSLYYNTKLVESQVITRTITTGTKHLTSCLSLYAGHTQFGILDGSSQTTIFKLQYHAV 180
           ++ S Y+ T+ V SQV       G + + +C++  +   +F  L  S + T F L+Y  +
Sbjct: 27  DDVSPYFKTEPVRSQVHLE----GNRLVLTCMAEGSWPLEFKWLHNSRELTKFSLEYRYM 82

Query: 181 LSSTQTT 201
           ++S   T
Sbjct: 83  ITSLDRT 89



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>AUR1_YEAST (P36107) Aureobasidin A resistance protein|
          Length = 401

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 331 GSNINGIFSMLFAAYLEILAWIKYNL*Y--SPFCFAA 227
           G N++ I +    ++L+ILAW+ Y L +  +PF  AA
Sbjct: 130 GDNLSDILATSTNSFLDILAWLPYGLFHFGAPFVVAA 166



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>Y2535_VIBVY (Q7MII1) UPF0294 protein VV2535|
          Length = 284

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 100 LYAGHTQFGILDGSSQTTI----FKLQYHAVLSSTQTTLNPHGKLD 225
           ++A HT F I +    TTI    F  Q H   SST+ +++  G+L+
Sbjct: 18  IFAFHTVFHIPEQPEMTTISDGSFNQQLHCYESSTRASIDQEGRLN 63



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>AUR1_CANAL (O13332) Aureobasidin A resistance protein homolog|
          Length = 471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -3

Query: 331 GSNINGIFSMLFAAYLEILAWIKYNL*YSPFCFAACQV 218
           G N++ + + +    L+ILAW+ Y + +  F F    +
Sbjct: 143 GDNLSNVLATITTGVLDILAWLPYGIIHFSFPFVLAAI 180



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>PURA_BRAJA (Q89EM1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 430

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 240 NGEYYKLYLIQARISR*AANSMENMPLIFDPGYNLQEIDLFRLQ 371
           NG+ YKL L+ + + R    S+    ++FDP   L E+   R Q
Sbjct: 46  NGKTYKLALLPSGVLREHKLSVIGNGVVFDPAAFLDEVTKLRAQ 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,839,151
Number of Sequences: 219361
Number of extensions: 988226
Number of successful extensions: 2036
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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