Clone Name | rbastl14b10 |
---|---|
Clone Library Name | barley_pub |
>DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-)| Length = 1097 Score = 76.3 bits (186), Expect = 2e-14 Identities = 32/40 (80%), Positives = 35/40 (87%) Frame = -2 Query: 391 LNGKPRVLTLKQDLHYWPTWELTFEPETDTWKRRTIKALQ 272 LNGKPRVLTLKQDLHYWPTWEL F+PET W+R +KALQ Sbjct: 1058 LNGKPRVLTLKQDLHYWPTWELRFDPETALWRRNILKALQ 1097
>CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 401 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 84 QLSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLG 209 +L G+EI +S++E H L+P LAHR H V L G Sbjct: 106 RLEAGDEIAISALEHHANLLPWQQLAHRRNLHLVVLPLDAHG 147
>CUT9_SCHPO (P41889) 20S cyclosome/APC complex protein cut9 (Cell untimely torn| protein 9) Length = 671 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +3 Query: 30 YRIIKIYEIGTEKTHPAVQLSTGNEILMSSIELHYI--LVPTLTLAHRH 170 YR +K+Y+ + + + LST + + ++I L Y+ +P L + H H Sbjct: 526 YRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLH 574
>CSD_STAES (Q8CTA4) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 413 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = +3 Query: 87 LSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLGLPKEGPLKISQQGKINQAT 266 +S G+EI+++ +E H +VP LA R + L + + K+G L++ +AT Sbjct: 113 ISEGDEIVVTEMEHHANIVPWQQLAKR-----KNATLKFIPMTKDGELQLDD----IKAT 163 Query: 267 VGCNAFIVLLFH 302 + IV + H Sbjct: 164 INDKTKIVAIAH 175
>CSD_STAEQ (Q5HQQ0) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 413 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = +3 Query: 87 LSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLGLPKEGPLKISQQGKINQAT 266 +S G+EI+++ +E H +VP LA R + L + + K+G L++ +AT Sbjct: 113 ISEGDEIVVTEMEHHANIVPWQQLAKR-----KNATLKFIPMTKDGELQLDD----IKAT 163 Query: 267 VGCNAFIVLLFH 302 + IV + H Sbjct: 164 INDKTKIVAIAH 175
>RCNA_ECOLI (P76425) Nickel/cobalt efflux system rcnA| Length = 274 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 Query: 273 SQPWLDLFCLVVIFSVGLL*EGQAWRGE 190 ++PWL L V+I S + WRGE Sbjct: 86 AEPWLQLISAVIIISTAFWMFWRTWRGE 113
>RCNA_ECOL6 (Q8FFX9) Nickel/cobalt efflux system rcnA| Length = 274 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 Query: 273 SQPWLDLFCLVVIFSVGLL*EGQAWRGE 190 ++PWL L V+I S + WRGE Sbjct: 86 AEPWLQLISAVIIISTAFWMFWRTWRGE 113
>RCNA_ECO57 (Q8X3U5) Nickel/cobalt efflux system rcnA| Length = 283 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 Query: 273 SQPWLDLFCLVVIFSVGLL*EGQAWRGE 190 ++PWL L V+I S + WRGE Sbjct: 86 AEPWLQLISAVIIISTAFWMFWRTWRGE 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,455,176 Number of Sequences: 219361 Number of extensions: 1046644 Number of successful extensions: 2476 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2476 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)