ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009550.1| Triticum aestivum clone wr1.pk164.h10:fis, full i... 226 4e-56
2gb|AY618693.1| Avena strigosa strain CI3815 cycloartenol synthas... 155 1e-34
3emb|AJ311790.1|AST311790 Avena strigosa mRNA for cycloartenol sy... 155 1e-34
4gb|AY618694.1| Avena ventricosa strain CAV2835 cycloartenol synt... 147 3e-32
5gb|AY618692.1| Avena prostrata strain CC7060 cycloartenol syntha... 147 3e-32
6gb|AY618691.1| Avena longiglumis strain CC7250 cycloartenol synt... 147 3e-32
7gb|AY618690.1| Avena longiglumis strain CC4719 cycloartenol synt... 147 3e-32
8gb|BT018875.1| Zea mays clone EL01N0563E07.d mRNA sequence 139 6e-30
9gb|AY618689.1| Avena clauda strain CAV5566/1 cycloartenol syntha... 139 6e-30
10gb|AY108167.1| Zea mays PCO144257 mRNA sequence 139 6e-30
11gb|AY109591.1| Zea mays CL201_1 mRNA sequence 127 2e-26
12dbj|AK103080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 4e-25
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
14dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
15ref|XM_464088.1| Oryza sativa (japonica cultivar-group), mRNA 105 9e-20
16dbj|AK121211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 9e-20
17gb|AF169966.1|AF169966 Oryza sativa putative cycloartenol syntha... 105 9e-20
18gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome... 70 5e-09
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
20dbj|AK068026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
21dbj|AK066327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
22gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 5e-09
23dbj|AB116237.1| Cucurbita pepo CPX mRNA for cycloartenol synthas... 64 3e-07
24dbj|AB116238.1| Cucurbita pepo CPQ mRNA for cucurbitadienol synt... 60 5e-06
25dbj|AB055509.1| Betula platyphylla CASBPX1 mRNA for cycloartenol... 56 7e-05
26ref|XM_531506.1| PREDICTED: Pan troglodytes LOC474058 (LOC474058... 48 0.018
27gb|BC035638.1| Homo sapiens lanosterol synthase (2,3-oxidosquale... 48 0.018
28ref|NM_001001438.1| Homo sapiens lanosterol synthase (2,3-oxidos... 48 0.018
29ref|NM_002340.3| Homo sapiens lanosterol synthase (2,3-oxidosqua... 48 0.018
30dbj|AK096769.1| Homo sapiens cDNA FLJ39450 fis, clone PROST2008770 48 0.018
31dbj|AK092334.1| Homo sapiens cDNA FLJ35015 fis, clone OCBBF2014229 48 0.018
32dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, ... 48 0.018
33dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, ... 48 0.018
34emb|AJ239031.1|HSA239031 Homo sapiens LSS gene, partial, exons 2... 48 0.018
35dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 48 0.018
36gb|U22526.1|HSU22526 Human 2,3-oxidosqualene-lanosterol cyclase ... 48 0.018
37dbj|AP001468.1| Homo sapiens genomic DNA, chromosome 21q22.3, cl... 48 0.018
38dbj|D63807.1|HUMLASY Human mRNA for lanosterol synthase, complet... 48 0.018
39gb|AY352269.1| Glycine max cycloartenol synthase (CAS) mRNA, par... 46 0.071
40dbj|AB181246.1| Lotus japonicus OSC5 mRNA for cycloartenol synth... 46 0.071
41dbj|D89619.1| Pisum sativum mRNA for cycloartenol synthase, comp... 46 0.071
42dbj|AB025968.1| Glycyrrhiza glabra mRNA for cycloartenol synthas... 46 0.071
43dbj|AB033334.1| Luffa cylindrica LcCAS1 mRNA for cycloartenol sy... 46 0.071
44dbj|AB009031.1| Panax ginseng OSCPNZ1 mRNA for Oxidosqualene Cyc... 46 0.071
45gb|AY520819.1| Centella asiatica cycloartenol synthase (OSCCCS) ... 44 0.28
46gb|DQ268870.1| Ricinus communis cycloartenol synthase mRNA, comp... 42 1.1
47gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, comp... 42 1.1
48dbj|AB009029.1| Panax ginseng OSCPNX1 mRNA for Cycloartenol Synt... 42 1.1
49gb|AC102104.17| Mus musculus chromosome 15, clone RP23-85P16, co... 40 4.4
50gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, co... 40 4.4
51gb|AC127267.3| Mus musculus BAC clone RP23-401H14 from chromosom... 40 4.4
52gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, c... 40 4.4
53gb|AC134392.5| Mus musculus chromosome 16, clone RP24-346N12, co... 40 4.4
54gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.4
55gb|S81221.1| lanosterol synthase [human, fetal liver, mRNA Parti... 40 4.4
56gb|AC127346.4| Mus musculus BAC clone RP23-54F4 from chromosome ... 40 4.4
57gb|AC064864.4| Homo sapiens BAC clone RP11-407M6 from 2, complet... 40 4.4
58gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 4.4
59emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 40 4.4
60emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23,... 40 4.4
61dbj|AB055510.1| Betula platyphylla CASBPX2 mRNA for cycloartenol... 40 4.4
62dbj|AB058507.1| Costus speciosus CSOSC1 mRNA for cycloartenol sy... 40 4.4 
>gb|BT009550.1| Triticum aestivum clone wr1.pk164.h10:fis, full insert mRNA sequence
          Length = 1300

 Score =  226 bits (114), Expect = 4e-56
 Identities = 201/228 (88%), Gaps = 4/228 (1%)
 Strand = Plus / Minus

                                                                        
Query: 100  tctatacggctaccagatctccacctgcatctagctacattattgcaaacatacactgtt 159
            ||||||||||||||||||||||||||||| ||||| |||||||| || | | ||||||||
Sbjct: 1136 tctatacggctaccagatctccacctgcacctagcaacattattacagaaacacactgtt 1077

                                                                        
Query: 160  ccagcacgtaaaccgcaagccaaaaaagaaggaacatggtactatttcttgcccaccccc 219
            ||||||||||| |||   |||||| | ||||||| | ||||||| |||||| || | |||
Sbjct: 1076 ccagcacgtaacccg---gccaaaga-gaaggaagacggtactacttcttggccgcgccc 1021

                                                                        
Query: 220  aagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactgggaa 279
            |  || |||||||||||||| || |||||||||||||||||||||||||  |||||||| 
Sbjct: 1020 agcacccggcagcggtactcgccaagcgcccagatagggaagatgttccgatactgggag 961

                                                            
Query: 280  tagctgatcatgcagttcttgttgaatactcccatgatctcttgctga 327
            |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 960  tagctgatcatgcagttcttgttgaagactcccatgatctcttgctga 913
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>gb|AY618693.1| Avena strigosa strain CI3815 cycloartenol synthase gene, complete cds
          Length = 2280

 Score =  155 bits (78), Expect = 1e-34
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccagacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>emb|AJ311790.1|AST311790 Avena strigosa mRNA for cycloartenol synthase (cs1 gene)
          Length = 2280

 Score =  155 bits (78), Expect = 1e-34
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccagacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>gb|AY618694.1| Avena ventricosa strain CAV2835 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score =  147 bits (74), Expect = 3e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccacacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>gb|AY618692.1| Avena prostrata strain CC7060 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score =  147 bits (74), Expect = 3e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||||| |||||| |||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccagacagggaatatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>gb|AY618691.1| Avena longiglumis strain CC7250 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score =  147 bits (74), Expect = 3e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccacacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>gb|AY618690.1| Avena longiglumis strain CC4719 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score =  147 bits (74), Expect = 3e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccacacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagttcttgttgaagactcccatgatctcttg 2161
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>gb|BT018875.1| Zea mays clone EL01N0563E07.d mRNA sequence
          Length = 1716

 Score =  139 bits (70), Expect = 6e-30
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                        
Query: 217  cccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactgg 276
            |||| ||||||||| ||||||||||| || |||||||| |||||| ||||||||||||||
Sbjct: 1538 cccaggactcggcaccggtactctcccagagcccagatcgggaaggtgttcctgtactgg 1479

                                                              
Query: 277  gaatagctgatcatgcagttcttgttgaatactcccatgatctcttgctg 326
            || || ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1478 gagtaactgatcatgcagttcttgttgaacactcctatgatctcttgctg 1429
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>gb|AY618689.1| Avena clauda strain CAV5566/1 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score =  139 bits (70), Expect = 6e-30
 Identities = 97/106 (91%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 2266 ccaagactcggcaacggtactctccgagtgcccacacagggaagatgtccctgtactggg 2207

                                                          
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttg 323
            | || |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2206 agtaactgatcatgcagtttttgttgaagactcccatgatctcttg 2161
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>gb|AY108167.1| Zea mays PCO144257 mRNA sequence
          Length = 764

 Score =  139 bits (70), Expect = 6e-30
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                       
Query: 217 cccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactgg 276
           |||| ||||||||| ||||||||||| || |||||||| |||||| ||||||||||||||
Sbjct: 453 cccaggactcggcaccggtactctcccagagcccagatcgggaaggtgttcctgtactgg 394

                                                             
Query: 277 gaatagctgatcatgcagttcttgttgaatactcccatgatctcttgctg 326
           || || ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 393 gagtaactgatcatgcagttcttgttgaacactcctatgatctcttgctg 344
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>gb|AY109591.1| Zea mays CL201_1 mRNA sequence
          Length = 2920

 Score =  127 bits (64), Expect = 2e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                        
Query: 220  aagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactgggaa 279
            |||||||| || |||||||| || || ||||| || ||||||||||||||||||||||| 
Sbjct: 2499 aagactcgacaccggtactcacccagagcccaaatcgggaagatgttcctgtactgggag 2440

                                                            
Query: 280  tagctgatcatgcagttcttgttgaatactcccatgatctcttgctga 327
            ||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 2439 tagcttatcatgcagttcttgttgaacactcctatgatctcttgctga 2392
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>dbj|AK103080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118E24, full
            insert sequence
          Length = 2458

 Score =  123 bits (62), Expect = 4e-25
 Identities = 101/114 (88%)
 Strand = Plus / Minus

                                                                        
Query: 219  caagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggga 278
            ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 2282 caagactcggcagcggtactctccgagagcccaaatagggaatatgttcctgtactgaga 2223

                                                                  
Query: 279  atagctgatcatgcagttcttgttgaatactcccatgatctcttgctgaaggaa 332
             ||||||||   |||||| ||| ||||| |||| ||||||||||||||| ||||
Sbjct: 2222 gtagctgatggcgcagtttttgctgaatgctccgatgatctcttgctgagggaa 2169
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  107 bits (54), Expect = 2e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                           
Query: 219     caagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggga 278
               ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 2111140 caagactcggcagcggtactctccgagagcccaaatagggaatatgttcctgtactgaga 2111199

                                                         
Query: 279     atagctgatcatgcagttcttgttgaatactcccatgatctc 320
                ||||||||   |||||| ||| ||||| |||| ||||||||
Sbjct: 2111200 gtagctgatggcgcagtttttgctgaatgctccgatgatctc 2111241



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                           
Query: 218     ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
               ||||||| ||||  |||||||| || || ||||| |||||||||||||| || |||| ||
Sbjct: 2128674 ccaagacgcggcgacggtactccccaagggcccaaatagggaagatgtttctatactcgg 2128733

                                                          
Query: 278     aatagctgatcatgcagttcttgttgaatactcccatgatctc 320
               | ||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 2128734 agtagctgatcatgcagtttttgttgaagactccaatgatctc 2128776
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score =  107 bits (54), Expect = 2e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 219   caagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggga 278
             ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 25833 caagactcggcagcggtactctccgagagcccaaatagggaatatgttcctgtactgaga 25892

                                                       
Query: 279   atagctgatcatgcagttcttgttgaatactcccatgatctc 320
              ||||||||   |||||| ||| ||||| |||| ||||||||
Sbjct: 25893 gtagctgatggcgcagtttttgctgaatgctccgatgatctc 25934



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                         
Query: 218   ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
             ||||||| ||||  |||||||| || || ||||| |||||||||||||| || |||| ||
Sbjct: 43367 ccaagacgcggcgacggtactccccaagggcccaaatagggaagatgtttctatactcgg 43426

                                                        
Query: 278   aatagctgatcatgcagttcttgttgaatactcccatgatctc 320
             | ||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 43427 agtagctgatcatgcagtttttgttgaagactccaatgatctc 43469
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>ref|XM_464088.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2651

 Score =  105 bits (53), Expect = 9e-20
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||| ||||  |||||||| || || ||||| |||||||||||||| || |||| ||
Sbjct: 2405 ccaagacgcggcgacggtactccccaagggcccaaatagggaagatgtttctatactcgg 2346

                                                             
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttgctg 326
            | ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 2345 agtagctgatcatgcagtttttgttgaagactccaatgatctcttgctg 2297
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>dbj|AK121211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089G09, full
            insert sequence
          Length = 2651

 Score =  105 bits (53), Expect = 9e-20
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||| ||||  |||||||| || || ||||| |||||||||||||| || |||| ||
Sbjct: 2405 ccaagacgcggcgacggtactccccaagggcccaaatagggaagatgtttctatactcgg 2346

                                                             
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttgctg 326
            | ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 2345 agtagctgatcatgcagtttttgttgaagactccaatgatctcttgctg 2297
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>gb|AF169966.1|AF169966 Oryza sativa putative cycloartenol synthase (CAS1) mRNA, partial cds
          Length = 2413

 Score =  105 bits (53), Expect = 9e-20
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                        
Query: 218  ccaagactcggcagcggtactctccgagcgcccagatagggaagatgttcctgtactggg 277
            ||||||| ||||  |||||||| || || ||||| |||||||||||||| || |||| ||
Sbjct: 2261 ccaagacgcggcgacggtactccccaagggcccaaatagggaagatgtttctatactcgg 2202

                                                             
Query: 278  aatagctgatcatgcagttcttgttgaatactcccatgatctcttgctg 326
            | ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 2201 agtagctgatcatgcagtttttgttgaagactccaatgatctcttgctg 2153
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>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18,
              complete sequence
          Length = 172281

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                     
Query: 253    atagggaagatgttcctgtactgggaatagctgatcatg 291
              ||||||||||||||||||||||||||||| |||||||||
Sbjct: 125073 atagggaagatgttcctgtactgggaataactgatcatg 125111
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                      
Query: 253     atagggaagatgttcctgtactgggaatagctgatcatg 291
               ||||||||||||||||||||||||||||| |||||||||
Sbjct: 4527329 atagggaagatgttcctgtactgggaataactgatcatg 4527291
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>dbj|AK068026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131K12, full
            insert sequence
          Length = 2558

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 253  atagggaagatgttcctgtactgggaatagctgatcatg 291
            ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2275 atagggaagatgttcctgtactgggaataactgatcatg 2237
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>dbj|AK066327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062J12, full
            insert sequence
          Length = 2578

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 253  atagggaagatgttcctgtactgggaatagctgatcatg 291
            ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2330 atagggaagatgttcctgtactgggaataactgatcatg 2292
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                      
Query: 253     atagggaagatgttcctgtactgggaatagctgatcatg 291
               ||||||||||||||||||||||||||||| |||||||||
Sbjct: 4546720 atagggaagatgttcctgtactgggaataactgatcatg 4546682
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>dbj|AB116237.1| Cucurbita pepo CPX mRNA for cycloartenol synthase, complete cds
          Length = 2556

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 277  gaatagctgatcatgcagttcttgttgaatactcccatgatctc 320
            |||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 2350 gaatagctaatcatgcagttcttgttaaagactcccatgatctc 2307
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>dbj|AB116238.1| Cucurbita pepo CPQ mRNA for cucurbitadienol synthase, complete cds
          Length = 2444

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 235  tactctccgagcgcccagatagggaagatgttcctgtactgggaatagctgatcatgcag 294
            |||||||| |||||||| || ||||||||||| | |||    | |||  |||||||||||
Sbjct: 2290 tactctccaagcgcccaaatggggaagatgtttcggtatgcagcatatgtgatcatgcag 2231

                                      
Query: 295  ttcttgttgaatactcccatgatctc 320
            ||||| ||||| ||||||||||||||
Sbjct: 2230 ttcttattgaacactcccatgatctc 2205
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>dbj|AB055509.1| Betula platyphylla CASBPX1 mRNA for cycloartenol synthase, complete
            cds
          Length = 2460

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 277  gaatagctgatcatgcagttcttgttgaatactcccatgatctc 320
            |||||||||||||| || ||||||||||| |||||||| |||||
Sbjct: 2281 gaatagctgatcatacaattcttgttgaaaactcccataatctc 2238
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>ref|XM_531506.1| PREDICTED: Pan troglodytes LOC474058 (LOC474058), mRNA
          Length = 3778

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 3729 ccgagggcccagatggggaagatgttcctgta 3698
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>gb|BC035638.1| Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol
            cyclase), transcript variant 1, mRNA (cDNA clone
            MGC:46212 IMAGE:5547173), complete cds
          Length = 4236

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 2192 ccgagggcccagatggggaagatgttcctgta 2161
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>ref|NM_001001438.1| Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol
            cyclase) (LSS), transcript variant 2, mRNA
          Length = 2658

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 2182 ccgagggcccagatggggaagatgttcctgta 2151
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>ref|NM_002340.3| Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol
            cyclase) (LSS), transcript variant 1, mRNA
          Length = 4225

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 2182 ccgagggcccagatggggaagatgttcctgta 2151
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>dbj|AK096769.1| Homo sapiens cDNA FLJ39450 fis, clone PROST2008770
          Length = 2414

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 1966 ccgagggcccagatggggaagatgttcctgta 1935
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>dbj|AK092334.1| Homo sapiens cDNA FLJ35015 fis, clone OCBBF2014229
          Length = 3600

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 1579 ccgagggcccagatggggaagatgttcctgta 1548
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>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete
             sequences
          Length = 224098

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 241   ccgagcgcccagatagggaagatgttcctgta 272
             ||||| |||||||| |||||||||||||||||
Sbjct: 47809 ccgagggcccagatggggaagatgttcctgta 47840
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>dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, map 22, complete
             sequences
          Length = 102671

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 241   ccgagcgcccagatagggaagatgttcctgta 272
             ||||| |||||||| |||||||||||||||||
Sbjct: 84680 ccgagggcccagatggggaagatgttcctgta 84711
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>emb|AJ239031.1|HSA239031 Homo sapiens LSS gene, partial, exons 22, 23 and joined CDS
          Length = 1900

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 241 ccgagcgcccagatagggaagatgttcctgta 272
           ||||| |||||||| |||||||||||||||||
Sbjct: 995 ccgagggcccagatggggaagatgttcctgta 964
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>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105
          Length = 340000

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 241    ccgagcgcccagatagggaagatgttcctgta 272
              ||||| |||||||| |||||||||||||||||
Sbjct: 208881 ccgagggcccagatggggaagatgttcctgta 208912
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>gb|U22526.1|HSU22526 Human 2,3-oxidosqualene-lanosterol cyclase mRNA, complete cds
          Length = 3206

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 2301 ccgagggcccagatggggaagatgttcctgta 2270
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>dbj|AP001468.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:21B35B20, telomere
             region, complete sequence
          Length = 67332

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 241   ccgagcgcccagatagggaagatgttcctgta 272
             ||||| |||||||| |||||||||||||||||
Sbjct: 36684 ccgagggcccagatggggaagatgttcctgta 36715
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>dbj|D63807.1|HUMLASY Human mRNA for lanosterol synthase, complete cds
          Length = 2631

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| |||||||||||||||||
Sbjct: 2168 ccgagggcccagatggggaagatgttcctgta 2137
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>gb|AY352269.1| Glycine max cycloartenol synthase (CAS) mRNA, partial cds
          Length = 225

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 284 tgatcatgcagttcttgttgaatactcccat 314
           |||||||||| ||||||||||| ||||||||
Sbjct: 148 tgatcatgcaattcttgttgaagactcccat 118
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>dbj|AB181246.1| Lotus japonicus OSC5 mRNA for cycloartenol synthase, complete cds
          Length = 2274

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 284  tgatcatgcagttcttgttgaatactcccat 314
            |||||||||| ||||||||||| ||||||||
Sbjct: 2197 tgatcatgcaattcttgttgaagactcccat 2167
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>dbj|D89619.1| Pisum sativum mRNA for cycloartenol synthase, complete cds
          Length = 2677

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 284  tgatcatgcagttcttgttgaatactcccat 314
            |||||||||| ||||||||||| ||||||||
Sbjct: 2312 tgatcatgcaattcttgttgaagactcccat 2282
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>dbj|AB025968.1| Glycyrrhiza glabra mRNA for cycloartenol synthase, complete cds
          Length = 2889

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 284  tgatcatgcagttcttgttgaatactcccat 314
            |||||||||| ||||||||||| ||||||||
Sbjct: 2327 tgatcatgcaattcttgttgaagactcccat 2297
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>dbj|AB033334.1| Luffa cylindrica LcCAS1 mRNA for cycloartenol synthase, complete cds
          Length = 2433

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 286  atcatgcagttcttgttgaatactcccatgatctc 320
            ||||||||||||||||| || | ||||||||||||
Sbjct: 2221 atcatgcagttcttgttaaaaattcccatgatctc 2187
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>dbj|AB009031.1| Panax ginseng OSCPNZ1 mRNA for Oxidosqualene Cyclase, complete cds
          Length = 2684

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 277  gaatagctgatcatgcagttcttgttgaatactcc 311
            ||||| || |||||||||||||||||||| |||||
Sbjct: 2373 gaataacttatcatgcagttcttgttgaacactcc 2339
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>gb|AY520819.1| Centella asiatica cycloartenol synthase (OSCCCS) mRNA, complete cds
          Length = 2547

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 247  gcccagatagggaagatgttcctgtactgggaatagctgatcatgcagttcttgttgaat 306
            ||||| |||||||| ||||| ||||||   | |||  ||||||| || ||||||||||| 
Sbjct: 2265 gcccaaatagggaaaatgtttctgtacgcagcataagtgatcatacaattcttgttgaag 2206

                          
Query: 307  actcccatgatctc 320
            || |||||||||||
Sbjct: 2205 acccccatgatctc 2192
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>gb|DQ268870.1| Ricinus communis cycloartenol synthase mRNA, complete cds
          Length = 2529

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 286  atcatgcagttcttgttgaatactcccatgatctcttgctg 326
            |||||||| ||| | ||||||||||||||||| || |||||
Sbjct: 2286 atcatgcaattcctattgaatactcccatgatttcctgctg 2246
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>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence
          Length = 200074

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 134    ctacattattgcaaacataca 154
              |||||||||||||||||||||
Sbjct: 118774 ctacattattgcaaacataca 118794
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>dbj|AB009029.1| Panax ginseng OSCPNX1 mRNA for Cycloartenol Synthase, complete cds
          Length = 2559

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 284  tgatcatgcagttcttgttgaatactcccatgatctc 320
            |||||||||| ||||||| ||| || |||||||||||
Sbjct: 2281 tgatcatgcaattcttgtcgaagacccccatgatctc 2245
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>gb|AC102104.17| Mus musculus chromosome 15, clone RP23-85P16, complete sequence
          Length = 180310

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    gatagggaagatgttcctgt 271
              ||||||||||||||||||||
Sbjct: 114778 gatagggaagatgttcctgt 114797
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>gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, complete sequence
          Length = 228337

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    gatagggaagatgttcctgt 271
              ||||||||||||||||||||
Sbjct: 189574 gatagggaagatgttcctgt 189555
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>gb|AC127267.3| Mus musculus BAC clone RP23-401H14 from chromosome 6, complete sequence
          Length = 186704

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    aaaaaagaaggaacatggta 200
              ||||||||||||||||||||
Sbjct: 181615 aaaaaagaaggaacatggta 181634
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>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence
          Length = 173862

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    atgaccagattcagatgtac 55
             ||||||||||||||||||||
Sbjct: 57553 atgaccagattcagatgtac 57572
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>gb|AC134392.5| Mus musculus chromosome 16, clone RP24-346N12, complete sequence
          Length = 170666

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccacctgcatctagctacat 139
             ||||||||||||||||||||
Sbjct: 83034 ccacctgcatctagctacat 83053
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 31      agcttatgaccagattcagatgtacaaa 58
               |||||| ||||||||||||| |||||||
Sbjct: 2005090 agcttacgaccagattcagacgtacaaa 2005117
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>gb|S81221.1| lanosterol synthase [human, fetal liver, mRNA Partial, 2637 nt]
          Length = 2637

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 241  ccgagcgcccagatagggaagatgttcctgta 272
            ||||| |||||||| || ||||||||||||||
Sbjct: 2168 ccgagggcccagatgggaaagatgttcctgta 2137
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>gb|AC127346.4| Mus musculus BAC clone RP23-54F4 from chromosome 6, complete sequence
          Length = 203187

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   aaaaaagaaggaacatggta 200
             ||||||||||||||||||||
Sbjct: 42326 aaaaaagaaggaacatggta 42345
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>gb|AC064864.4| Homo sapiens BAC clone RP11-407M6 from 2, complete sequence
          Length = 183687

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    atgtacaaacagatttattc 69
             ||||||||||||||||||||
Sbjct: 22974 atgtacaaacagatttattc 22993
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      tattctatacggctaccaga 116
               ||||||||||||||||||||
Sbjct: 3652226 tattctatacggctaccaga 3652207
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>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    aaaaaagaaggaacatggta 200
              ||||||||||||||||||||
Sbjct: 223715 aaaaaagaaggaacatggta 223696
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>emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23, complete sequence
          Length = 182212

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 134    ctacattattgcaaacatacactg 157
              ||||||||||||||| ||||||||
Sbjct: 173613 ctacattattgcaaaaatacactg 173636
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>dbj|AB055510.1| Betula platyphylla CASBPX2 mRNA for cycloartenol synthase, complete
            cds
          Length = 2514

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 229  cagcggtactctccgagcgcccagatagggaagatgttcctgta 272
            |||||||||||||| |  ||||| ||||| || |||||||||||
Sbjct: 2413 cagcggtactctcccaatgcccaaataggaaaaatgttcctgta 2370
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>dbj|AB058507.1| Costus speciosus CSOSC1 mRNA for cycloartenol synthase, complete cds
          Length = 2683

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 232  cggtactctccgagcgcccagatagggaagatgttcctgtactgggaatagctgatcatg 291
            ||||| |||||||| |||||||| || || ||||| |  || |  ||||| |||||||||
Sbjct: 2455 cggtattctccgagagcccagattggaaatatgtttcgatattctgaataactgatcatg 2396

                                            
Query: 292  cagttcttgttgaatactcccatgatctcttg 323
            || || ||||| || || ||||| ||||||||
Sbjct: 2395 caatttttgttaaaaacccccataatctcttg 2364


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,773,115
Number of Sequences: 3902068
Number of extensions: 2773115
Number of successful extensions: 46915
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46778
Number of HSP's gapped (non-prelim): 137
length of query: 332
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 310
effective length of database: 17,147,199,772
effective search space: 5315631929320
effective search space used: 5315631929320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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