ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3 31 0.96
2UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13) 30 1.6
3P2Y10_HUMAN (O00398) Putative P2Y purinoceptor 10 (P2Y10) (P2Y-l... 29 3.7
4SIN1_SCHPO (Q9P7Y9) Stress-activated map kinase-interacting prot... 28 8.2

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 79  EQLSRLQQPHAADPPGSQHNKVHTAHRSHT 168
           +Q S+LQ PH+  PP  QH + H  H+  T
Sbjct: 406 QQHSQLQPPHSQHPPPHQHIQHHPNHQHQT 435



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>UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13)|
          Length = 1591

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  GTEQLSRLQQPHAADPPGSQHNKVHTAHRSHT 168
           G+ QLS L Q H  D    + + +H+ H SH+
Sbjct: 270 GSSQLSELDQYHEQDDDHRETDSIHSCHSSHS 301



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>P2Y10_HUMAN (O00398) Putative P2Y purinoceptor 10 (P2Y10) (P2Y-like receptor)|
          Length = 339

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 178 KTCWCDFCVRCELYYVVTLVGQLRVVAVIGLVALFLLFNYCEWKTYV 38
           K+C+ D   +      V LVG + V  + G V   ++  +C WKT +
Sbjct: 179 KSCFADLGYK--QMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTI 223



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>SIN1_SCHPO (Q9P7Y9) Stress-activated map kinase-interacting protein 1|
           (SAPK-interacting protein 1)
          Length = 665

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
 Frame = +1

Query: 88  SRLQQPHAADPPGSQH--------NKVHTAHRSHTNKSSQQFIGKLRDTLS 216
           +++++  AA P  S+H        NK H  H S T+  SQ+    ++DTL+
Sbjct: 386 AQIKENQAAYPFKSKHPTSIPEANNKTHIRHTSSTSSQSQKQAQDVKDTLN 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,828,052
Number of Sequences: 219361
Number of extensions: 552103
Number of successful extensions: 1566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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