ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KGX15_CENLL (Q86QV0) Potassium channel toxin gamma-KTx 1.5 (Ergt... 28 5.5
2KGX14_CENSC (Q86QU6) Potassium channel toxin gamma-KTx 1.4 (Ergt... 28 7.2
3IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E... 27 9.3
4KGX16_CENEX (Q86QU1) Potassium channel toxin gamma-KTx 1.6 (Ergt... 27 9.3
5KGX13_CENGR (Q86QV3) Potassium channel toxin gamma-KTx 1.3 (Ergt... 27 9.3
6TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein 27 9.3

>KGX15_CENLL (Q86QV0) Potassium channel toxin gamma-KTx 1.5 (Ergtoxin-like|
           protein 1) (ErgTx1) (CllErg1) (CllErgTx1)
          Length = 42

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 113 SCYQTSRFTRHAQHHLLHDAFTTKIGHRGIECMFYVC 3
           SC   SR +++  +    D    K GH G  CMF+ C
Sbjct: 4   SCVDKSRCSKYGYYQECQDC-CKKAGHNGGTCMFFKC 39



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>KGX14_CENSC (Q86QU6) Potassium channel toxin gamma-KTx 1.4 (Ergtoxin-like|
           protein 1) (ErgTx1) (CsErg1) (CsErgTx1)
          Length = 42

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 113 SCYQTSRFTRHAQHHLLHDAFTTKIGHRGIECMFYVC 3
           SC   SR  ++  +    D    K GH G  CMF+ C
Sbjct: 4   SCVDKSRCAKYGYYQECQDC-CKKAGHNGGTCMFFKC 39



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>IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)|
           (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25
           kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso
           protein) (eIF(iso)4E)
          Length = 198

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 134 DHWGLIWSCYQTSRFTRHAQHHL 66
           D WGL  + +QTS+ T +A+ HL
Sbjct: 61  DFWGLHETIFQTSKLTANAEIHL 83



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>KGX16_CENEX (Q86QU1) Potassium channel toxin gamma-KTx 1.6 (Ergtoxin-like|
           protein 1) (ErgTx1) (CexErg1) (CexErgTx1)
          Length = 42

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 113 SCYQTSRFTRHAQHHLLHDAFTTKIGHRGIECMFYVC 3
           SC   SR  ++  +    D    K GH G  CMF+ C
Sbjct: 4   SCVDKSRCAKYGYYQECQDC-CKKAGHSGGTCMFFKC 39



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>KGX13_CENGR (Q86QV3) Potassium channel toxin gamma-KTx 1.3 (Ergtoxin-like|
           protein 1) (ErgTx1) (CgErg1) (CgErgTx1)
          Length = 42

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 113 SCYQTSRFTRHAQHHLLHDAFTTKIGHRGIECMFYVC 3
           SC   SR  ++  +    D    K GH G  CMF+ C
Sbjct: 4   SCVDKSRCAKYGHYQECTDC-CKKYGHNGGTCMFFKC 39



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>TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein|
          Length = 312

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +1

Query: 142 HRDGRKENQSVMWLKPPLSLQSLMQLMTCQSIRHDQPQDHVNTDEALLQ 288
           HR G+ +N+ V WL+    L     L+   ++   + Q  +  +EA  Q
Sbjct: 80  HRQGQLQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQ 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,010,147
Number of Sequences: 219361
Number of extensions: 870627
Number of successful extensions: 1657
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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