Clone Name | rbastl14b05 |
---|---|
Clone Library Name | barley_pub |
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.0 bits (66), Expect = 1.6 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +2 Query: 71 NNNIGGDTKTSHLTEEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIY 250 +++ T +S + +E S GSS S AA+ PK++A + P N+ SC A Sbjct: 245 SSSTSSSTSSSTSSTQETAATTS-EGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAV 301 Query: 251 SSKLAV 268 SS L + Sbjct: 302 SSDLTL 307
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -3 Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -3 Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -3 Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1| Length = 1076 Score = 28.5 bits (62), Expect = 4.7 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = +2 Query: 95 KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 229 K SH+ T+E KK F PGSS+S + S+ S +PP +HS Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 147 PGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTI 49 P + G + S W F PPM+ ++FSS+ I Sbjct: 246 PNEDHGISYLS---WMAFAIPPMIFYMFSSWFI 275
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 111 VKWDVFVSPPMLLFLFSSYTI 49 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)| Length = 459 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -2 Query: 183 GLSATAA*LLLEPGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSIL 16 G + A+ L L GN QG + K + F PP L LF N+ W +L Sbjct: 97 GKAMIASFLTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPAC--NISHMWKVL 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,744,821 Number of Sequences: 219361 Number of extensions: 793654 Number of successful extensions: 2365 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2337 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2365 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)