ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 30 1.6
2PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 29 3.6
3PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 29 3.6
4PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 29 3.6
5LUZP1_HUMAN (Q86V48) Leucine zipper protein 1 28 4.7
6YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III 28 7.9
7NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate... 28 7.9
8RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.... 28 7.9

>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +2

Query: 71  NNNIGGDTKTSHLTEEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIY 250
           +++    T +S  + +E     S  GSS S AA+   PK++A  + P N+  SC  A   
Sbjct: 245 SSSTSSSTSSSTSSTQETAATTS-EGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAV 301

Query: 251 SSKLAV 268
           SS L +
Sbjct: 302 SSDLTL 307



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>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 269 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 117
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = +2

Query: 95  KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 229
           K SH+       T+E KK    F PGSS+S    +    S+ S +PP   +HS
Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485



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>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III|
          Length = 577

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 147 PGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTI 49
           P  + G  + S   W  F  PPM+ ++FSS+ I
Sbjct: 246 PNEDHGISYLS---WMAFAIPPMIFYMFSSWFI 275



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>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2|
           (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 111 VKWDVFVSPPMLLFLFSSYTI 49
           ++W VF  PPM ++L +SY I
Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261



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>RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 459

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -2

Query: 183 GLSATAA*LLLEPGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSIL 16
           G +  A+ L L  GN QG     + K + F  PP  L LF       N+   W +L
Sbjct: 97  GKAMIASFLTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPAC--NISHMWKVL 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,744,821
Number of Sequences: 219361
Number of extensions: 793654
Number of successful extensions: 2365
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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