Clone Name	rbastl14b05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i...	270	2e-69
2	gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is...	232	5e-58
3	emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...	96	7e-17
4	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	96	7e-17
5	dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon...	96	7e-17
6	dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon...	96	7e-17
7	emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	96	7e-17
8	emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for pu...	94	3e-16
9	emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu...	94	3e-16
10	emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr...	86	7e-14
11	gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence	56	6e-05
12	gb|AY110434.1| Zea mays CL533_2 mRNA sequence	52	0.001
13	gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se...	46	0.058
14	gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s...	46	0.058
15	emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5...	44	0.23
16	gb|AY109824.1| Zea mays CL533_1 mRNA sequence	44	0.23
17	emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr...	42	0.91
18	gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, compl...	42	0.91
19	gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N...	42	0.91
20	gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom...	40	3.6
21	gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com...	40	3.6
22	gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome...	40	3.6
23	gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c...	40	3.6
24	gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome...	40	3.6
25	gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ...	40	3.6
26	emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch...	40	3.6
27	emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chr...	40	3.6
28	emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr...	40	3.6
29	gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's...	40	3.6
30	emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr...	40	3.6
31	emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo...	40	3.6
32	emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ...	40	3.6
33	gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp...	40	3.6
34	gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, co...	40	3.6
35	dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duc...	40	3.6
36	dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ...	40	3.6
37	gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c...	40	3.6
38	dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome	40	3.6
39	emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro...	40	3.6
40	emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ...	40	3.6
41	emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on ch...	40	3.6
42	emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9...	40	3.6
43	gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, com...	40	3.6
44	gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, c...	40	3.6
45	gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete...	40	3.6
46	gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl...	40	3.6

---

>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  270 bits (136), Expect = 2e-69
 Identities = 145/148 (97%)
 Strand = Plus / Minus

                                                                        
Query: 130  gccttgttcattcccaggctccagcaagagttaggccgccgtcgccgagagaccaaaatc 189
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                        
Query: 190  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatata 249
            |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaaaaatata 2577

                                        
Query: 250  cagctcaaaactggctgttgctcacatc 277
            ||||||||||||||||||||||||||||
Sbjct: 2576 cagctcaaaactggctgttgctcacatc 2549



 Score =  208 bits (105), Expect = 7e-51
 Identities = 105/105 (100%)
 Strand = Plus / Minus

                                                                        
Query: 4    tattgtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaact 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2814 tattgtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaact 2755

                                                         
Query: 64   gaaaagaaataataacattggaggagacacaaaaacatcccattt 108
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2754 gaaaagaaataataacattggaggagacacaaaaacatcccattt 2710

---

>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  232 bits (117), Expect = 5e-58
 Identities = 143/149 (95%), Gaps = 2/149 (1%)
 Strand = Plus / Minus

                                                                        
Query: 130  gccttgttcattcccaggctccagcaagagttaggccgccgtcgcc-gagagaccaaaat 188
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagaccaaa-t 2635

                                                                        
Query: 189  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatat 248
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaaaaatat 2575

                                         
Query: 249  acagctcaaaactggctgttgctcacatc 277
            |||||||||||||||||||||||||||||
Sbjct: 2574 acagctcaaaactggctgttgctcacatc 2546



 Score =  212 bits (107), Expect = 4e-52
 Identities = 107/107 (100%)
 Strand = Plus / Minus

                                                                        
Query: 4    tattgtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaact 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2810 tattgtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaact 2751

                                                           
Query: 64   gaaaagaaataataacattggaggagacacaaaaacatcccatttga 110
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2750 gaaaagaaataataacattggaggagacacaaaaacatcccatttga 2704

---

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 88/102 (86%), Gaps = 7/102 (6%)
 Strand = Plus / Plus

                                                                         
Query: 183   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 235
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 42261 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 42320

                                                       
Query: 236   ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
             || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 42321 cttgcaaaaatatacagcacaaaactggctgttgctcacatc 42362



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 10    aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 69
             |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 42122 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 42181

                      
Query: 70    aaataataa 78
             || ||||||
Sbjct: 42182 aactaataa 42190

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 88/102 (86%), Gaps = 7/102 (6%)
 Strand = Plus / Plus

                                                                            
Query: 183      caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 235
                |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 24921676 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 24921735

                                                          
Query: 236      ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
                || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 24921736 cttgcaaaaatatacagcacaaaactggctgttgctcacatc 24921777



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 10       aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 69
                |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 24921537 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 24921596

                         
Query: 70       aaataataa 78
                || ||||||
Sbjct: 24921597 aactaataa 24921605

---

>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 88/102 (86%), Gaps = 7/102 (6%)
 Strand = Plus / Minus

                                                                        
Query: 183  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 235
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 2639 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 2580

                                                      
Query: 236  ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
            || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 2579 cttgcaaaaatatacagcacaaaactggctgttgctcacatc 2538



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 69
            |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 2778 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 2719

                     
Query: 70   aaataataa 78
            || ||||||
Sbjct: 2718 aactaataa 2710

---

>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 88/102 (86%), Gaps = 7/102 (6%)
 Strand = Plus / Minus

                                                                        
Query: 183  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 235
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 1545 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 1486

                                                      
Query: 236  ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
            || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 1485 cttgcaaaaatatacagcacaaaactggctgttgctcacatc 1444



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 69
            |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 1684 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 1625

                     
Query: 70   aaataataa 78
            || ||||||
Sbjct: 1624 aactaataa 1616

---

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 88/102 (86%), Gaps = 7/102 (6%)
 Strand = Plus / Plus

                                                                         
Query: 183   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 235
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 49790 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 49849

                                                       
Query: 236   ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
             || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 49850 cttgcaaaaatatacagcacaaaactggctgttgctcacatc 49891



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 10    aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 69
             |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 49651 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 49710

                      
Query: 70    aaataataa 78
             || ||||||
Sbjct: 49711 aactaataa 49719

---

>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar Gigante
          Length = 2599

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                        
Query: 211  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgc 270
            |||||||||| ||||||||| | |||| ||||||||||||||| ||||||||||||||||
Sbjct: 2572 aaacaataatgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2513

                   
Query: 271  tcacatc 277
            |||||||
Sbjct: 2512 tcacatc 2506

---

>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 87/101 (86%), Gaps = 7/101 (6%)
 Strand = Plus / Minus

                                                                        
Query: 184  aaaatccatggcttcttcctttcc-------tccaaacaataatcaacactcatgtaacc 236
            ||||||||||||||||| ||||||       || |||||||||| ||||||||| | |||
Sbjct: 2599 aaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgacc 2540

                                                     
Query: 237  tcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
            | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 2539 ttgcaaaaatatacagcacaaaactggctgttgctcacatc 2499

---

>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 211  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgc 270
            |||||||||  ||||||||| | |||| ||||||||||||||| ||||||||||||||||
Sbjct: 2666 aaacaataacgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2607

                   
Query: 271  tcacatc 277
            |||||||
Sbjct: 2606 tcacatc 2600

---

>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 222 aacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
           ||||||||| | | ||||||||| |||||||| |||||||||||||| ||| ||||
Sbjct: 132 aacactcatctgatctcgcaaaattatacagcccaaaactggctgttcctcgcatc 187



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 184 aaaatccatggcttcttcctttcc 207
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97

---

>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 236 ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 277
           ||||||||| |||||||| |||||||||||||| ||| ||||
Sbjct: 600 ctcgcaaaattatacagcccaaaactggctgttcctcgcatc 559



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 184 aaaatccatggcttcttcctttcc 207
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649

---

>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 93    caaaaacatcccatttgacagaagaag 119
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842

---

>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 93    caaaaacatcccatttgacagaagaag 119
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337

---

>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 57   aagaactgaaaagaaataataacatt 82
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204

---

>gb|AY109824.1| Zea mays CL533_1 mRNA sequence
          Length = 2894

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 236  ctcgcaaaaatatacagctcaaaactggctgttgctca 273
            ||||||||| |||||||||||||| || ||||| ||||
Sbjct: 2656 ctcgcaaaattatacagctcaaaattgtctgttcctca 2619

---

>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tcccaggctccagcaagagtt 161
             |||||||||||||||||||||
Sbjct: 87107 tcccaggctccagcaagagtt 87087

---

>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence
          Length = 67124

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 141  tcccaggctccagcaagagtt 161
            |||||||||||||||||||||
Sbjct: 3598 tcccaggctccagcaagagtt 3618

---

>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence
          Length = 83029

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tcccaggctccagcaagagtt 161
             |||||||||||||||||||||
Sbjct: 34025 tcccaggctccagcaagagtt 34005

---

>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    gaaaagaaataataacattg 83
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342

---

>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaattgtgtaagaactgaaa 67
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504

---

>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ccatggcttcttcctttcct 208
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503

---

>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 44     ttacaaattgtgtaagaactgaaaagaaataa 75
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665

---

>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence
          Length = 190023

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   cccaggctccagcaagagtt 161
             ||||||||||||||||||||
Sbjct: 97827 cccaggctccagcaagagtt 97808

---

>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tgaaaagaaataataacatt 82
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844

---

>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9,
          complete sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 51 ttgtgtaagaactgaaaagaaata 74
          |||||||||||||||||| |||||
Sbjct: 55 ttgtgtaagaactgaaaaaaaata 32

---

>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a
             novel pseudogene, complete sequence
          Length = 110443

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   caaaaatatacagctcaaaa 259
             ||||||||||||||||||||
Sbjct: 35208 caaaaatatacagctcaaaa 35189

---

>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     ttgtgtaagaactgaaaagaaata 74
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398

---

>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    tgaaaagaaataataacatt 82
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606

---

>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
             Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes
             and two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttcattcccaggctccagca 155
             ||||||||||||||||||||
Sbjct: 35935 ttcattcccaggctccagca 35916

---

>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  taagaactgaaaagaaataa 75
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620

---

>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tgaaaagaaataataacatt 82
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763

---

>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acaaattgtgtaagaactga 65
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382

---

>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ttgttcattcccaggctcca 152
             ||||||||||||||||||||
Sbjct: 70836 ttgttcattcccaggctcca 70817

---

>dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820409O14 product:unclassifiable, full
            insert sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  cagctcaaaactggctgttg 269
            ||||||||||||||||||||
Sbjct: 2547 cagctcaaaactggctgttg 2566

---

>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130097D18
           product:unclassifiable, full insert sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 cccaggctccagcaagagtt 161
           ||||||||||||||||||||
Sbjct: 28  cccaggctccagcaagagtt 9

---

>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   gtgtaagaactgaaaagaaa 72
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855

---

>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     taagaactgaaaagaaataataac 79
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724

---

>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gaaaagaaataataacattg 83
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810

---

>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  tgaaaagaaataataacatt 82
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379

---

>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    gctcaaaactggctgttgct 271
              ||||||||||||||||||||
Sbjct: 133196 gctcaaaactggctgttgct 133215

---

>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    taacattggaggagacacaaaaac 99
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116

---

>gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, complete sequence
          Length = 154555

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cagctcaaaactggctgttg 269
              ||||||||||||||||||||
Sbjct: 125944 cagctcaaaactggctgttg 125963

---

>gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, complete sequence
          Length = 242449

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   cagctcaaaactggctgttg 269
             ||||||||||||||||||||
Sbjct: 68402 cagctcaaaactggctgttg 68421

---

>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttcccaggctccagcaagag 159
             ||||||||||||||||||||
Sbjct: 42008 ttcccaggctccagcaagag 41989

---

>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   gaaaagaaataataacattg 83
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,484,247
Number of Sequences: 3902068
Number of extensions: 3484247
Number of successful extensions: 77326
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77202
Number of HSP's gapped (non-prelim): 123
length of query: 277
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 255
effective length of database: 17,147,199,772
effective search space: 4372535941860
effective search space used: 4372535941860
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---