Clone Name | rbastl14b03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC132954.4| Mus musculus BAC clone RP24-210F23 from 12, complete sequence Length = 160118 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gaaccatttccttttgccttg 316 ||||||||||||||||||||| Sbjct: 85929 gaaccatttccttttgccttg 85949
>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence Length = 163466 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cggctcagcagtggaaagta 80 |||||||||||||||||||| Sbjct: 62283 cggctcagcagtggaaagta 62264
>gb|AC012160.7| Drosophila melanogaster clone BACR06G02, complete sequence Length = 172069 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cggctcagcagtggaaagta 80 |||||||||||||||||||| Sbjct: 41423 cggctcagcagtggaaagta 41442
>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence Length = 171059 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 tctcttgaaccatttccttttgcc 313 ||||||||||||||||||| |||| Sbjct: 71165 tctcttgaaccatttccttgtgcc 71142
>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 238147 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctaaaacacttgaccagata 116 |||||||||||||||||||| Sbjct: 224012 ctaaaacacttgaccagata 224031
>emb|BX936335.6| Zebrafish DNA sequence from clone CH211-287C12 in linkage group 3, complete sequence Length = 62086 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 taatacgtacaacatgatga 192 |||||||||||||||||||| Sbjct: 8861 taatacgtacaacatgatga 8842
>gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, complete sequence Length = 163031 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 tatgtccacggctcagcagtggaa 76 |||||||| ||||||||||||||| Sbjct: 55535 tatgtccagggctcagcagtggaa 55558
>ref|NG_004788.1| Homo sapiens cofilin pseudogene 1 (CFLP1) on chromosome 10 Length = 26979 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 tatgtccacggctcagcagtggaa 76 |||||||| ||||||||||||||| Sbjct: 19501 tatgtccagggctcagcagtggaa 19524
>ref|NM_031320.1| Rattus norvegicus cadherin EGF LAG seven-pass G-type receptor 3 (Celsr3), mRNA Length = 11868 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 acttgaccagatacaagctctaga 127 |||||||||| ||||||||||||| Sbjct: 4977 acttgaccagctacaagctctaga 4954
>gb|AC008179.2| Homo sapiens BAC clone RP11-576F1 from 2, complete sequence Length = 181745 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaatcaagacatgaaaagac 20 |||||||||||||||||||| Sbjct: 117240 aaatcaagacatgaaaagac 117221
>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete sequence Length = 298703 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cggctcagcagtggaaagta 80 |||||||||||||||||||| Sbjct: 171640 cggctcagcagtggaaagta 171659
>dbj|AB011528.1| Rattus norvegicus mRNA for MEGF2, complete cds Length = 11868 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 acttgaccagatacaagctctaga 127 |||||||||| ||||||||||||| Sbjct: 4977 acttgaccagctacaagctctaga 4954 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,773,508 Number of Sequences: 3902068 Number of extensions: 2773508 Number of successful extensions: 51893 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51878 Number of HSP's gapped (non-prelim): 15 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)