>gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome 15, complete
            sequence
          Length = 148390

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 365  tagatgccaatggagaatttgtt 387
            |||||||||||||||||||||||
Sbjct: 3710 tagatgccaatggagaatttgtt 3732

>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete sequence
          Length = 211214

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 365    tagatgccaatggagaatttgtt 387
              |||||||||||||||||||||||
Sbjct: 132932 tagatgccaatggagaatttgtt 132954

>gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, complete sequence
          Length = 255976

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 365    tagatgccaatggagaatttgtt 387
              |||||||||||||||||||||||
Sbjct: 184455 tagatgccaatggagaatttgtt 184433

>emb|AL356154.13| Human DNA sequence from clone RP11-102H24 on chromosome 10 Contains a
             replication protein A2 32kDa (RPA2) pseudogene, complete
             sequence
          Length = 157722

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 45    ttatatatatgtagaaataaca 66
             ||||||||||||||||||||||
Sbjct: 99188 ttatatatatgtagaaataaca 99167

>gb|AC079362.36| Homo sapiens 12 BAC RP11-754N21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 71854

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    attatatatatgtagaaataa 64
             |||||||||||||||||||||
Sbjct: 14184 attatatatatgtagaaataa 14164

>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
             sequence
          Length = 271546

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    attatatatatgtagaaata 63
             ||||||||||||||||||||
Sbjct: 15881 attatatatatgtagaaata 15900

>gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome 14, complete
           sequence
          Length = 163089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  agcatgcaaattatatatatgtag 58
           |||||||||||||| |||||||||
Sbjct: 698 agcatgcaaattatgtatatgtag 721

>gb|AY257527.1| Bacillus thuringiensis bacteriophage Bam35c, complete genome
          Length = 14935

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  ataggaaaaggattagaagc 218
            ||||||||||||||||||||
Sbjct: 2843 ataggaaaaggattagaagc 2862

>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 37     catgcaaattatatatatgtagaaataa 64
              |||||||||||| |||||||| ||||||
Sbjct: 532967 catgcaaattatttatatgtataaataa 532994

>gb|AC144935.3| Mus musculus BAC clone RP24-340M21 from chromosome 9, complete sequence
          Length = 109624

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 186   caaacttgccaccataggaaaaggatta 213
             |||||||||| || ||||||||||||||
Sbjct: 45419 caaacttgcctccttaggaaaaggatta 45446

>emb|CR388064.10| Zebrafish DNA sequence from clone CH211-80E15 in linkage group 16,
              complete sequence
          Length = 119301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 250    aaatctcgaaaagttaactttatt 273
              ||||| ||||||||||||||||||
Sbjct: 101911 aaatcccgaaaagttaactttatt 101934

>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete
             sequence
          Length = 140103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   caaattgactacagtgagct 131
             ||||||||||||||||||||
Sbjct: 47044 caaattgactacagtgagct 47063

>gb|AC092001.4| Homo sapiens BAC clone RP11-373D7 from 7, complete sequence
          Length = 26356

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    catgcaaattatatatatgt 56
             ||||||||||||||||||||
Sbjct: 12564 catgcaaattatatatatgt 12583

>emb|AL731813.23| Human DNA sequence from clone RP11-354N9 on chromosome 9, complete
             sequence
          Length = 69434

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    caaattatatatatgtagaaataa 64
             ||||||||||||||||| ||||||
Sbjct: 54718 caaattatatatatgtacaaataa 54695

>emb|AL512650.8| Human DNA sequence from clone RP11-23B9 on chromosome 1 Contains part
             of the ESRRG gene for  estrogen-related receptor gamma,
             complete sequence
          Length = 57317

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    catgcaaattatatatatgtagaaataa 64
             |||||||||||| |||||||| ||||||
Sbjct: 44646 catgcaaattatttatatgtataaataa 44619

>gb|AC135241.3| Mus musculus chromosome UNK clone RP24-340G21, complete sequence
          Length = 109610

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 186   caaacttgccaccataggaaaaggatta 213
             |||||||||| || ||||||||||||||
Sbjct: 45405 caaacttgcctccttaggaaaaggatta 45432

>emb|BX842622.1| Neurospora crassa DNA linkage group I BAC clone B15B3
          Length = 76690

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  aatgctgaccatgagtttac 154
            ||||||||||||||||||||
Sbjct: 9910 aatgctgaccatgagtttac 9891

>emb|AJ536073.1|BTH536073 Bacillus thuringiensis serovar israelensis pGIL01 plasmid
          Length = 14931

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  ataggaaaaggattagaagc 218
            ||||||||||||||||||||
Sbjct: 2841 ataggaaaaggattagaagc 2860

>emb|BX530081.6| Zebrafish DNA sequence from clone CH211-121B13 in linkage group 14,
             complete sequence
          Length = 162058

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gcatgcaaattatatatatg 55
             ||||||||||||||||||||
Sbjct: 54565 gcatgcaaattatatatatg 54584

>gb|AC008646.7| Homo sapiens chromosome 5 clone CTB-182O9, complete sequence
          Length = 174928

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    catgcaaattatatatatgt 56
             ||||||||||||||||||||
Sbjct: 56818 catgcaaattatatatatgt 56837

>gb|AC008415.6| Homo sapiens chromosome 5 clone CTC-283O18, complete sequence
          Length = 168368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     catgcaaattatatatatgt 56
              ||||||||||||||||||||
Sbjct: 140887 catgcaaattatatatatgt 140906

>gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromosome 7, complete
              sequence
          Length = 168496

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     catgcaaattatatatatgt 56
              ||||||||||||||||||||
Sbjct: 158230 catgcaaattatatatatgt 158211

>gb|AC078955.25| Homo sapiens 12 BAC RP11-543H12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159577

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    tacagtgagcttacaatgct 140
              ||||||||||||||||||||
Sbjct: 109073 tacagtgagcttacaatgct 109092

>dbj|AP006293.2| Homo sapiens genomic DNA, chromosome 9 clone:RP11-818I20, complete
             sequence
          Length = 155000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    caaattatatatatgtagaaataa 64
             ||||||||||||||||| ||||||
Sbjct: 96460 caaattatatatatgtacaaataa 96437

>dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-71P3, complete
             sequence
          Length = 121627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   aatgctgaccatgagtttac 154
             ||||||||||||||||||||
Sbjct: 90983 aatgctgaccatgagtttac 91002

>gb|AC173113.4| Mus musculus BAC clone RP23-120D6 from chromosome 3, complete sequence
          Length = 172004

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    catgcaaattatatatatgt 56
             ||||||||||||||||||||
Sbjct: 80033 catgcaaattatatatatgt 80052

>gb|AC121951.3| Mus musculus BAC clone RP24-217M7 from 9, complete sequence
          Length = 163528

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 186    caaacttgccaccataggaaaaggatta 213
              |||||||||| || ||||||||||||||
Sbjct: 162177 caaacttgcctccttaggaaaaggatta 162204

>gb|AC135289.3| Mus musculus BAC clone RP23-279D12 from 3, complete sequence
          Length = 180967

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    catgcaaattatatatatgt 56
             ||||||||||||||||||||
Sbjct: 16626 catgcaaattatatatatgt 16607

>emb|AL844225.9| Mouse DNA sequence from clone RP23-119M24 on chromosome 2, complete
              sequence
          Length = 137220

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    cctagaggcacacaaattga 119
              ||||||||||||||||||||
Sbjct: 124066 cctagaggcacacaaattga 124047

>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     catgcaaattatatatatgt 56
              ||||||||||||||||||||
Sbjct: 155163 catgcaaattatatatatgt 155182

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    gaaaagttaactttattcgg 276
              ||||||||||||||||||||
Sbjct: 555033 gaaaagttaactttattcgg 555052

>gb|AC160120.2| Mus musculus BAC clone RP23-407B7 from chromosome 14, complete sequence
          Length = 202981

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    agcatgcaaattatatatatgtag 58
             |||||||||||||| |||||||||
Sbjct: 31636 agcatgcaaattatgtatatgtag 31613

>dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clone:RP11-816L8,
            complete sequence
          Length = 221198

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  aatgctgaccatgagtttac 154
            ||||||||||||||||||||
Sbjct: 8262 aatgctgaccatgagtttac 8281

>dbj|AB020875.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
            cancer , segment 7/10
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 41   caaattatatatatgtagaaataa 64
            ||||||||||||||||| ||||||
Sbjct: 1418 caaattatatatatgtacaaataa 1395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,991,010
Number of Sequences: 3902068
Number of extensions: 3991010
Number of successful extensions: 73243
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73157
Number of HSP's gapped (non-prelim): 86
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)