>CAD13_CHICK (P33150) Cadherin-13 precursor (Truncated-cadherin) (T-cadherin)|
           (T-cad)
          Length = 712

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 167 NSHIQFILLKDSCLRNFHCPACIFSVASPPITSSMRSLKMDLSMSK--TMPCSSPSGL 334
           N+H Q +LL++    N++ P  +     PP+T++   LK+ +   K   M CS+   L
Sbjct: 639 NTHAQVVLLQNLKKANYNIPISVTDSGKPPLTNN-TELKLQVCSCKKSRMDCSASDAL 695

>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +1

Query: 124  LHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLATYNLVNEVPENGPLNV 300
            L  L+A +  G D Q+  +  T   Q P+  P  SLH +  LA  N  N     GP+ V
Sbjct: 959  LEALLAAVKTGQDLQKLVTPETPLVQYPSLAPWLSLHSI--LARINECNRCHHEGPVTV 1015

>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 200 SCLRNFHCPACIFSVASPPITSSMRSL-KMDLSMSKTMPCSSP 325
           S L+NF  P+C F+   P   S ++ L K+DLS +  + CS P
Sbjct: 210 SLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYN-PLKCSIP 251

>ENGA_RHILO (Q986D9) GTP-binding protein engA|
          Length = 479

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 251 PPITSSMRSLKMDLSMSKTMP------CSSPSGLPQSFISYNASS 367
           PP  +  R     ++ +KT P      CS P  +PQS++ Y ++S
Sbjct: 404 PPAVAGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNS 448

>LAR_CAEEL (Q9BMN8) Tyrosine-protein phosphatase Lar-like precursor (EC|
           3.1.3.48) (Protein-tyrosine phosphate 3)
          Length = 2200

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 245 ASPPITSSMRSLKMDLSMSKTMPCSSPSGLPQSFISY 355
           A+ P++   RSL  D  + K  PC  P+GL   +  Y
Sbjct: 437 ATAPVSPQARSLNRDSILVKWGPCEQPNGLITGYKVY 473

>GLB_NASMU (P31331) Globin (Myoglobin)|
          Length = 147

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 291 RSIFRDLIDEVIGGEATEKMQA 226
           RSIF + +D+  GG+ATE M++
Sbjct: 112 RSIFGEFLDKATGGKATESMKS 133

>Y676_MYCPN (P75116) Hypothetical protein MPN676 (K05_orf106)|
          Length = 106

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = +1

Query: 85  FYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLAT 255
           +Y+      +++   ++ +K+P+GN  Q  ++  T+   L   + LS  HLL  + T
Sbjct: 46  YYVFGFFTFRWQRSLIITSKVPSGNGIQFDFNSRTSHWLLNFLYSLSEYHLLFKVKT 102

>PCDBF_HUMAN (Q9Y5E8) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 58  PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231
           PEF + LY   + ++S      + +    +  G + + SYS+Y + +++   F LSSL
Sbjct: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSL 297

>SYFB_NOVAD (Q2GAI7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 796

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 303 LDIERSIFRDLIDEVIGGEATEKMQAGQWKLRRQ 202
           LD    +   LI E+ GGEA+E ++AG+  L R+
Sbjct: 368 LDTGLDLLTSLILEICGGEASEVVRAGEPPLARK 401

>ENGA_BRUSU (Q8G2E8) GTP-binding protein engA|
          Length = 483

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
 Frame = +2

Query: 251 PPITSSMRSLKMDLSMSKTMP------CSSPSGLPQSFISY 355
           PP  S  R     ++  KT P      CS P  +PQS++ Y
Sbjct: 408 PPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRY 448

>ENGA_BRUME (Q8YFH2) GTP-binding protein engA|
          Length = 483

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
 Frame = +2

Query: 251 PPITSSMRSLKMDLSMSKTMP------CSSPSGLPQSFISY 355
           PP  S  R     ++  KT P      CS P  +PQS++ Y
Sbjct: 408 PPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRY 448

>PCDBF_PANTR (Q5DRD3) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 58  PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231
           PEF + LY   + ++S      + +    +  G + + SYS+Y +  ++   F LSSL
Sbjct: 240 PEFAQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSL 297

>DHB1_RAT (P51657) Estradiol 17-beta-dehydrogenase 1 (EC 1.1.1.62)|
           (17-beta-HSD 1) (17-beta-hydroxysteroid dehydrogenase 1)
          Length = 344

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 121 GLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPL 222
           GLHL V      +D  QS+ VY T R L +Q PL
Sbjct: 16  GLHLAVRL---ASDRSQSFKVYATLRDLKSQGPL 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,399,341
Number of Sequences: 219361
Number of extensions: 910793
Number of successful extensions: 2641
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2641
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)