>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score =  131 bits (66), Expect = 2e-27
 Identities = 144/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 217  ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 276
            |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 1389 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 1330

                                                                        
Query: 277  gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 336
            | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 1329 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 1270

                                                              
Query: 337  ctgtaacaacagaaactccgacaataagaggtaaaactggggctggggtc 386
             || ||| ||||||||||| |||||||| || |||||||| |||||||||
Sbjct: 1269 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtc 1220

>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score =  131 bits (66), Expect = 2e-27
 Identities = 144/170 (84%)
 Strand = Plus / Minus

                                                                       
Query: 217 ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 276
           |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 575 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 516

                                                                       
Query: 277 gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 336
           | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 515 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 456

                                                             
Query: 337 ctgtaacaacagaaactccgacaataagaggtaaaactggggctggggtc 386
            || ||| ||||||||||| |||||||| || |||||||| |||||||||
Sbjct: 455 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtc 406

>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 270  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 329
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 3524 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 3465

                                                                 
Query: 330  atcacgactgtaacaacagaaactccgacaataagaggtaaaactggggctgg 382
            || || | || ||  || |||||||||||||||||||| || || ||||||||
Sbjct: 3464 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctgg 3412

>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full
            insert sequence
          Length = 1629

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 270  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 329
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 1183 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 1124

                                                                 
Query: 330  atcacgactgtaacaacagaaactccgacaataagaggtaaaactggggctgg 382
            || || | || ||  || |||||||||||||||||||| || || ||||||||
Sbjct: 1123 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctgg 1071

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                            
Query: 315      aaccttggcatactgatcacgactgtaacaacagaaactccgacaataagaggtaaaact 374
                ||||||||||| ||||| || | || ||  || |||||||||||||||||||| || || 
Sbjct: 11024109 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 11024168

                        
Query: 375      ggggctgg 382
                ||||||||
Sbjct: 11024169 ggggctgg 11024176



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 270      gaacttagggaagtcattcctacagcgctctggtacaagtc 310
                |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 11023970 gaacctagggtagtcattcccacagcactttggtacaagtc 11024010

>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 315   aaccttggcatactgatcacgactgtaacaacagaaactccgacaataagaggtaaaact 374
             ||||||||||| ||||| || | || ||  || |||||||||||||||||||| || || 
Sbjct: 52991 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 53050

                     
Query: 375   ggggctgg 382
             ||||||||
Sbjct: 53051 ggggctgg 53058



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 270   gaacttagggaagtcattcctacagcgctctggtacaagtc 310
             |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 52852 gaacctagggtagtcattcccacagcactttggtacaagtc 52892

>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                          
Query: 315    aaccttggcatactgatcacgactgtaacaacagaaactccgacaataagaggtaaaact 374
              ||||||||||| ||||| || | || ||  || |||||||||||||||||||| || || 
Sbjct: 126951 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 127010

                      
Query: 375    ggggctgg 382
              ||||||||
Sbjct: 127011 ggggctgg 127018



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 270    gaacttagggaagtcattcctacagcgctctggtacaagtc 310
              |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 126812 gaacctagggtagtcattcccacagcactttggtacaagtc 126852

>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10
          Length = 1772

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 ctgctcggtgtgtttcctgaa 272
           |||||||||||||||||||||
Sbjct: 22  ctgctcggtgtgtttcctgaa 42

>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete
             sequence
          Length = 126358

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   ctgctcggtgtgtttcctgaa 272
             |||||||||||||||||||||
Sbjct: 11160 ctgctcggtgtgtttcctgaa 11140

>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ctttctcaatattgtcttcc 240
             ||||||||||||||||||||
Sbjct: 12002 ctttctcaatattgtcttcc 11983

>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ctttctcaatattgtcttcc 240
              ||||||||||||||||||||
Sbjct: 195772 ctttctcaatattgtcttcc 195753

>gb|AC125328.4| Mus musculus BAC clone RP23-181J14 from chromosome 15, complete sequence
          Length = 199674

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    gacaataagaggtaaaactg 375
              ||||||||||||||||||||
Sbjct: 117351 gacaataagaggtaaaactg 117370

>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the
             5' end of the BTBD4 gene for BTB (POZ) domain containing
             4, part of a gene for a tissue plasminogen activator
             protein and two CpG islands, complete sequence
          Length = 41932

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   cctttctgctcggtgtgttt 266
             ||||||||||||||||||||
Sbjct: 12460 cctttctgctcggtgtgttt 12441

>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18,
              complete sequence
          Length = 164758

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tgtttcaggctctctttctc 227
              ||||||||||||||||||||
Sbjct: 128434 tgtttcaggctctctttctc 128415

>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence
          Length = 68440

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   tatgtttcaggctctctttc 225
             ||||||||||||||||||||
Sbjct: 64829 tatgtttcaggctctctttc 64810

>gb|AC009126.2| Homo sapiens chromosome 5 clone RP11-496M2, complete sequence
          Length = 177978

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     attagccaacaatggtacaa 92
              ||||||||||||||||||||
Sbjct: 135591 attagccaacaatggtacaa 135610

>gb|AC022114.4| Homo sapiens chromosome 5 clone CTC-470L9, complete sequence
          Length = 102387

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    attagccaacaatggtacaa 92
             ||||||||||||||||||||
Sbjct: 58173 attagccaacaatggtacaa 58154

>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  tatgtttcaggctctctttc 225
            ||||||||||||||||||||
Sbjct: 2684 tatgtttcaggctctctttc 2665

>gb|AC009073.8|AC009073 Homo sapiens chromosome 16 clone RP11-31O11, complete sequence
          Length = 177978

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     attagccaacaatggtacaa 92
              ||||||||||||||||||||
Sbjct: 135591 attagccaacaatggtacaa 135610

>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tgtttcaggctctctttctc 227
             ||||||||||||||||||||
Sbjct: 91226 tgtttcaggctctctttctc 91207

>gb|AC122506.4| Mus musculus BAC clone RP24-426J4 from 15, complete sequence
          Length = 166555

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  gacaataagaggtaaaactg 375
            ||||||||||||||||||||
Sbjct: 8306 gacaataagaggtaaaactg 8287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,653,845
Number of Sequences: 3902068
Number of extensions: 3653845
Number of successful extensions: 61200
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61146
Number of HSP's gapped (non-prelim): 52
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)