>MQO_BLOFL (Q7VRS0) Probable malate:quinone oxidoreductase (EC 1.1.99.16)|
           (Malate dehydrogenase [acceptor]) (MQO)
          Length = 524

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 293 VSV*MDKLLLLSSPCWILHLFKESEKPQREIRSYYQCAPT 174
           +SV +   L +  P WI+H+++   KP +E  + +  A T
Sbjct: 31  MSVTLGSFLTILEPSWIIHIYERLNKPAQESSNSWNNAGT 70

>UCP1_MOUSE (P12242) Mitochondrial brown fat uncoupling protein 1 (UCP 1)|
           (Thermogenin)
          Length = 306

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
 Frame = -3

Query: 424 RESATVEGASSVYVAGLP*LIRGTI--CAGYAAEEMGWRPEF**SRCLSEWISCSCC-LL 254
           R  AT E  S+++    P L+R  I  C      ++  +     ++ L++ + C     L
Sbjct: 161 RVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDL-MKGALVNNKILADDVPCHLLSAL 219

Query: 253 PVGFC----------IFSKNLRSRKGRYVHIINVLQQ**LKEAGLDQFIASY*VIFIRVP 104
             GFC          + ++ + S  G+Y  + +       KE G   F   +   F+R+ 
Sbjct: 220 VAGFCTTLLASPVDVVKTRFINSLPGQYPSVPSCAMSMYTKE-GPTAFFKGFVASFLRLG 278

Query: 103 SCSHP*FVCVKQLSSVIMKCYETL 32
           S +   FVC +QL   +MK  +T+
Sbjct: 279 SWNVIMFVCFEQLKKELMKSRQTV 302

>IF2_LACSS (Q38W81) Translation initiation factor IF-2|
          Length = 937

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 248 NREKTARAAYPFRQTPASSKFRPP 319
           N+EKT RAA+  + TPA+SK   P
Sbjct: 41  NQEKTLRAAFQTKATPAASKPATP 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,473,592
Number of Sequences: 219361
Number of extensions: 1159135
Number of successful extensions: 2344
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)