ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474905.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
2gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
3gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
4gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
5emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4,... 111 2e-21
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
8dbj|AK122044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
9dbj|AK066074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.006
11gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic... 50 0.006
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
13dbj|AK119281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
14dbj|AK106680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
15emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.022
16emb|AL132967.1|ATT2J13 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.022
17dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone... 48 0.022
18ref|NM_115981.1| Arabidopsis thaliana unknown protein AT3G61170 ... 46 0.088
19ref|NM_121692.1| Arabidopsis thaliana unknown protein AT5G16860 ... 46 0.088
20ref|NM_119561.1| Arabidopsis thaliana EMB2758 AT4G33990 (EMB2758... 46 0.088
21ref|XM_474637.1| Oryza sativa (japonica cultivar-group), predic... 46 0.088
22emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 46 0.088
23emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BA... 46 0.088
24emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, B... 46 0.088
25emb|AJ224338.4|ATAJ4338 Arabidopsis thaliana partial FUSCA6 gene... 46 0.088
26gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete seq... 44 0.35
27gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete seq... 44 0.35
28ref|XM_635915.1| Dictyostelium discoideum hypothetical protein (... 42 1.4
29gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 42 1.4
30gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
31gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, co... 42 1.4
32gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 42 1.4
33gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome... 42 1.4
34ref|XM_652085.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 42 1.4
35gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome ... 42 1.4
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
38ref|XM_638757.1| Dictyostelium discoideum hypothetical protein (... 40 5.4
39gb|AC169700.1| Rhesus Macaque BAC CH250-20P14 (Children's Hospi... 40 5.4
40gb|AY386262.1| Homo sapiens c114 SLIT-like testicular protein mR... 40 5.4
41gb|AC154494.2| Mus musculus BAC clone RP24-111G24 from chromosom... 40 5.4
42gb|AC149430.1| Populus trichocarpa clone Pop1-116F13, complete s... 40 5.4
43ref|NM_014834.2| Homo sapiens leucine rich repeat containing 37A... 40 5.4
44gb|AC009449.7| Homo sapiens chromosome 17, clone CTD-2291H15, co... 40 5.4
45gb|AC006007.1| Homo sapiens PAC clone RP5-819O4 from 7, complete... 40 5.4
46gb|BC040501.1| Homo sapiens leucine rich repeat containing 37A, ... 40 5.4
47gb|AC166352.1| Mus musculus BAC clone RP24-234M1 from chromosome... 40 5.4
48gb|AC137830.6| Medicago truncatula clone mth2-33g10, complete se... 40 5.4
49gb|BC107850.1| Homo sapiens hypothetical protein LOC652203, mRNA... 40 5.4
50gb|BC041653.1| Homo sapiens hypothetical protein FLJ10120, mRNA ... 40 5.4
51gb|BC088375.1| Homo sapiens c114 SLIT-like testicular protein, m... 40 5.4
52emb|AL592171.8| Human DNA sequence from clone RP13-213F13 on chr... 40 5.4
53emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 5.4
54gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, com... 40 5.4
55emb|CR749232.1| Homo sapiens mRNA; cDNA DKFZp686N1231 (from clon... 40 5.4
56gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete s... 40 5.4
57emb|CR624169.1| full-length cDNA clone CS0DC007YA17 of Neuroblas... 40 5.4
58ref|NM_001006607.1| Homo sapiens c114 SLIT-like testicular prote... 40 5.4
59dbj|AK126994.1| Homo sapiens cDNA FLJ45049 fis, clone BRAWH3022347 40 5.4
60ref|NR_002940.1| Homo sapiens hypothetical protein FLJ10120 (FLJ... 40 5.4
61dbj|AK091733.1| Homo sapiens cDNA FLJ34414 fis, clone HEART2003168 40 5.4
62dbj|AK000982.1| Homo sapiens cDNA FLJ10120 fis, clone HEMBA1002863 40 5.4
63gb|AC008837.6| Homo sapiens chromosome 5 clone CTD-2151A2, compl... 40 5.4
64gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, comp... 40 5.4
65gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, compl... 40 5.4
66ref|XM_373737.3| PREDICTED: Homo sapiens hypothetical LOC388397 ... 40 5.4
67dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
68gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, co... 40 5.4
69emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chro... 40 5.4
70gb|AC139677.4| Homo sapiens chromosome 17, clone RP11-1070B7, co... 40 5.4
71gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175... 40 5.4
72gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, co... 40 5.4
73gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, co... 40 5.4
74gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, co... 40 5.4
75emb|AL824710.10| Mouse DNA sequence from clone RP23-35E16 on chr... 40 5.4
76gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
77emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 40 5.4 
>ref|XM_474905.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2694

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
            |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 2694 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 2635

                                                                        
Query: 318  ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
             ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 2634 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 2575

                                        
Query: 378  accacaaacgcgcaggttctttgtgatc 405
            |||||| || ||||||||||||||||||
Sbjct: 2574 accacatacacgcaggttctttgtgatc 2547
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>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
             complete sequence
          Length = 138677

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
             |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 90886 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 90945

                                                                         
Query: 318   ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
              ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 90946 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 91005

                                         
Query: 378   accacaaacgcgcaggttctttgtgatc 405
             |||||| || ||||||||||||||||||
Sbjct: 91006 accacatacacgcaggttctttgtgatc 91033
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>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
             complete sequence
          Length = 143263

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
             |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 32804 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 32863

                                                                         
Query: 318   ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
              ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 32864 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 32923

                                         
Query: 378   accacaaacgcgcaggttctttgtgatc 405
             |||||| || ||||||||||||||||||
Sbjct: 32924 accacatacacgcaggttctttgtgatc 32951
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>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
              complete sequence
          Length = 140322

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                          
Query: 258    tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
              |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 117653 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 117712

                                                                          
Query: 318    ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
               ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 117713 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 117772

                                          
Query: 378    accacaaacgcgcaggttctttgtgatc 405
              |||||| || ||||||||||||||||||
Sbjct: 117773 accacatacacgcaggttctttgtgatc 117800
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>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20,
             complete sequence
          Length = 147254

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                         
Query: 258   tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
             |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 58226 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 58285

                                                                         
Query: 318   ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
              ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 58286 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 58345

                                         
Query: 378   accacaaacgcgcaggttctttgtgatc 405
             |||||| || ||||||||||||||||||
Sbjct: 58346 accacatacacgcaggttctttgtgatc 58373
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                           
Query: 258     tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
               |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 7852529 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 7852588

                                                                           
Query: 318     ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
                ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 7852589 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 7852648

                                           
Query: 378     accacaaacgcgcaggttctttgtgatc 405
               |||||| || ||||||||||||||||||
Sbjct: 7852649 accacatacacgcaggttctttgtgatc 7852676



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                  
Query: 258     tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcg 308
               ||||||||| |||||||||||||||   |||| ||| ||||| ||||||||
Sbjct: 5076673 tcaccaataatcaccacaagagcacttcccatccttgaaatggtggaagcg 5076723
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                            
Query: 258      tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
                |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 13661745 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 13661804

                                                                            
Query: 318      ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
                 ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 13661805 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 13661864

                                            
Query: 378      accacaaacgcgcaggttctttgtgatc 405
                |||||| || ||||||||||||||||||
Sbjct: 13661865 accacatacacgcaggttctttgtgatc 13661892
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>dbj|AK122044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M07, full
            insert sequence
          Length = 4344

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
            |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 4199 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 4140

                                                                        
Query: 318  ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
             ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 4139 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 4080

                                        
Query: 378  accacaaacgcgcaggttctttgtgatc 405
            |||||| || ||||||||||||||||||
Sbjct: 4079 accacatacacgcaggttctttgtgatc 4052
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>dbj|AK066074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057F06, full
            insert sequence
          Length = 3509

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
            |||||||||| ||||||| |||||    |||||||| |||||||| || ||||||| |||
Sbjct: 3364 tcaccaatagccaccacatgagcatgaaccattcttgaaatgatgaaaacgactggggtc 3305

                                                                        
Query: 318  ccgcacaatgatctcatgatcaacaatctttgagatgtacgtgaaagcactgtggcaatc 377
             ||||| | ||||||||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct: 3304 gcgcactacgatctcatggtccacaatcttggaaatgtaggtgaatgcgctatggcaatc 3245

                                        
Query: 378  accacaaacgcgcaggttctttgtgatc 405
            |||||| || ||||||||||||||||||
Sbjct: 3244 accacatacacgcaggttctttgtgatc 3217
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 257      atcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
                |||||||||||||||| || ||||||   |||| || ||||||||||||||||
Sbjct: 18491891 atcaccaatagtcaccgcatgagcactttccatcctcaaaatgatggaagcga 18491943
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>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete
              sequence
          Length = 158170

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 257    atcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
              |||||||||||||||| || ||||||   |||| || ||||||||||||||||
Sbjct: 145786 atcaccaatagtcaccgcatgagcactttccatcctcaaaatgatggaagcga 145734
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 257      atcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
                |||||||||||||||| || ||||||   |||| || ||||||||||||||||
Sbjct: 18485932 atcaccaatagtcaccgcatgagcactttccatcctcaaaatgatggaagcga 18485984
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>dbj|AK119281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-C06, full
            insert sequence
          Length = 2912

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 257  atcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
            |||||||||||||||| || ||||||   |||| || ||||||||||||||||
Sbjct: 2863 atcaccaatagtcaccgcatgagcactttccatcctcaaaatgatggaagcga 2811
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>dbj|AK106680.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B02, full
            insert sequence
          Length = 3465

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 257  atcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
            |||||||||||||||| || ||||||   |||| || ||||||||||||||||
Sbjct: 2922 atcaccaatagtcaccgcatgagcactttccatcctcaaaatgatggaagcga 2870
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>emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F2K15
          Length = 129757

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 258   tcaccaatagtcaccacaagagca 281
             ||||||||||||||||||||||||
Sbjct: 18445 tcaccaatagtcaccacaagagca 18468
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>emb|AL132967.1|ATT2J13 Arabidopsis thaliana DNA chromosome 3, BAC clone T2J13
          Length = 85109

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 258  tcaccaatagtcaccacaagagca 281
            ||||||||||||||||||||||||
Sbjct: 3643 tcaccaatagtcaccacaagagca 3620
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>dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT21K08, TM0191,
             complete sequence
          Length = 76693

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 339   aacaatctttgagatgtacgtgaaagcactgtggcaatcaccacaaacgcgcaggttctt 398
             |||||| ||||| |||||  |||||||| |||| || ||||||||||| || ||||||||
Sbjct: 21920 aacaatatttgatatgtatttgaaagcagtgtgacagtcaccacaaacccgaaggttctt 21861
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>ref|NM_115981.1| Arabidopsis thaliana unknown protein AT3G61170 mRNA, complete cds
          Length = 2352

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 364  gcactgtggcaatcaccacaaacgcgcaggttctt 398
            |||||||||||||| ||||| ||||| ||||||||
Sbjct: 2198 gcactgtggcaatccccacagacgcgaaggttctt 2164
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>ref|NM_121692.1| Arabidopsis thaliana unknown protein AT5G16860 mRNA, complete cds
          Length = 2553

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 286  ccattcttaaaatgatggaagcgactggagtcccgcacaatgatctcatgatcaa 340
            ||||| || ||||||||||||||||| ||||||| ||  || || ||||||||||
Sbjct: 2525 ccatttttgaaatgatggaagcgacttgagtccctcaatataatatcatgatcaa 2471
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>ref|NM_119561.1| Arabidopsis thaliana EMB2758 AT4G33990 (EMB2758) mRNA, complete cds
          Length = 2472

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcgactggagtc 317
            |||||| || ||||| |||||||| || |||||||| |||||||| || ||  | || ||
Sbjct: 2472 tcaccagtaatcaccgcaagagcagactccattcttgaaatgatgaaaccggtttgaatc 2413

                           
Query: 318  ccgcacaatgatctc 332
            || ||||||||||||
Sbjct: 2412 cctcacaatgatctc 2398
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>ref|XM_474637.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1674

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 258  tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcg 308
            ||||||||| |||||||||||||||   |||| ||| ||||| ||||||||
Sbjct: 1674 tcaccaataatcaccacaagagcacttcccatccttgaaatggtggaagcg 1624
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
             complete sequence
          Length = 144144

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 258   tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaagcg 308
             ||||||||| |||||||||||||||   |||| ||| ||||| ||||||||
Sbjct: 52946 tcaccaataatcaccacaagagcacttcccatccttgaaatggtggaagcg 52996
to top
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project)
          Length = 98101

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 286  ccattcttaaaatgatggaagcgactggagtcccgcacaatgatctcatgatcaa 340
            ||||| || ||||||||||||||||| ||||||| ||  || || ||||||||||
Sbjct: 3452 ccatttttgaaatgatggaagcgacttgagtccctcaatataatatcatgatcaa 3398
to top
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
          Length = 109155

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 364   gcactgtggcaatcaccacaaacgcgcaggttctt 398
             |||||||||||||| ||||| ||||| ||||||||
Sbjct: 27069 gcactgtggcaatccccacagacgcgaaggttctt 27103
to top
>emb|AJ224338.4|ATAJ4338 Arabidopsis thaliana partial FUSCA6 gene, HD-GL2-1 and ASKbeta genes,
            and partial PCMP-H2 gene
          Length = 10380

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 364  gcactgtggcaatcaccacaaacgcgcaggttctt 398
            |||||||||||||| ||||| ||||| ||||||||
Sbjct: 9623 gcactgtggcaatccccacagacgcgaaggttctt 9657
to top
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence
          Length = 115348

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 260   accaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
             ||||| |||| | |||||||||||  |||||||| ||||| |||||||||
Sbjct: 17178 accaaaagtctctacaagagcacaaaccattcttgaaatggtggaagcga 17129
to top
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence
          Length = 139792

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 260   accaatagtcaccacaagagcacacgccattcttaaaatgatggaagcga 309
             ||||| |||| | |||||||||||  |||||||| ||||| |||||||||
Sbjct: 67917 accaaaagtctctacaagagcacaaaccattcttgaaatggtggaagcga 67966
to top
>ref|XM_635915.1| Dictyostelium discoideum hypothetical protein (DDB0218262), partial
           mRNA
          Length = 603

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  attttgattatacttttctaa 35
           |||||||||||||||||||||
Sbjct: 582 attttgattatacttttctaa 562
to top
>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the complete
              sequence
          Length = 273275

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 57     agatgtgagaaaatataaacactct 81
              |||||||||||||| ||||||||||
Sbjct: 188438 agatgtgagaaaatttaaacactct 188414
to top
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0010M24, complete sequence
          Length = 164853

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    ttatacttttctaatgaaatc 42
             |||||||||||||||||||||
Sbjct: 71527 ttatacttttctaatgaaatc 71507
to top
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence
          Length = 175586

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 194    tacattctgtgtacaaaaacc 214
              |||||||||||||||||||||
Sbjct: 109574 tacattctgtgtacaaaaacc 109594
to top
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    gtaacaaagaatggtacatca 192
              |||||||||||||||||||||
Sbjct: 503530 gtaacaaagaatggtacatca 503550
to top
>gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome 7, complete sequence
          Length = 190553

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     aaaataatagattttgattat 25
             |||||||||||||||||||||
Sbjct: 22844 aaaataatagattttgattat 22864
to top
>ref|XM_652085.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (4.t00032) partial mRNA
          Length = 1704

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 166  taatcagtaacaaagaatggtacat 190
            |||| ||||||||||||||||||||
Sbjct: 1375 taataagtaacaaagaatggtacat 1351
to top
>gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome 7, complete sequence
          Length = 265770

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     aaaataatagattttgattat 25
             |||||||||||||||||||||
Sbjct: 44361 aaaataatagattttgattat 44341
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 22      ttatacttttctaatgaaatc 42
               |||||||||||||||||||||
Sbjct: 9212493 ttatacttttctaatgaaatc 9212513
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 22      ttatacttttctaatgaaatc 42
               |||||||||||||||||||||
Sbjct: 9284190 ttatacttttctaatgaaatc 9284210
to top
>ref|XM_638757.1| Dictyostelium discoideum hypothetical protein (DDB0167384), partial
            mRNA
          Length = 6855

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 103  aactgtgaaatattagtaaagaaa 126
            ||||||||||||||| ||||||||
Sbjct: 2588 aactgtgaaatattattaaagaaa 2565
to top
>gb|AC169700.1| Rhesus Macaque  BAC CH250-20P14 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 195624

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaataatagattttgattat 25
             ||||||||||||||||||||
Sbjct: 72834 aaataatagattttgattat 72853
to top
>gb|AY386262.1| Homo sapiens c114 SLIT-like testicular protein mRNA, complete cds
          Length = 3597

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 3203 gattttgattatacttttct 3222
to top
>gb|AC154494.2| Mus musculus BAC clone RP24-111G24 from chromosome 9, complete sequence
          Length = 182959

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    atattagtaaagaaatagta 131
              ||||||||||||||||||||
Sbjct: 172956 atattagtaaagaaatagta 172937
to top
>gb|AC149430.1| Populus trichocarpa clone Pop1-116F13, complete sequence
          Length = 114875

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    atgtgagaaaatataaacac 78
             ||||||||||||||||||||
Sbjct: 14312 atgtgagaaaatataaacac 14331
to top
>ref|NM_014834.2| Homo sapiens leucine rich repeat containing 37A (LRRC37A), mRNA
          Length = 5190

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 4782 gattttgattatacttttct 4801
to top
>gb|AC009449.7| Homo sapiens chromosome 17, clone CTD-2291H15, complete sequence
          Length = 103577

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gattttgattatacttttct 33
             ||||||||||||||||||||
Sbjct: 22256 gattttgattatacttttct 22275
to top
>gb|AC006007.1| Homo sapiens PAC clone RP5-819O4 from 7, complete sequence
          Length = 124293

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aaatattagtaaagaaatag 129
             ||||||||||||||||||||
Sbjct: 18341 aaatattagtaaagaaatag 18360
to top
>gb|BC040501.1| Homo sapiens leucine rich repeat containing 37A, mRNA (cDNA clone
            MGC:33880 IMAGE:5295808), complete cds
          Length = 5190

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 4782 gattttgattatacttttct 4801
to top
>gb|AC166352.1| Mus musculus BAC clone RP24-234M1 from chromosome 9, complete sequence
          Length = 166299

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   atattagtaaagaaatagta 131
             ||||||||||||||||||||
Sbjct: 39312 atattagtaaagaaatagta 39293
to top
>gb|AC137830.6| Medicago truncatula clone mth2-33g10, complete sequence
          Length = 113855

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 258   tcaccaatagtcaccacaagagcacacgccattcttaaaatgatggaa 305
             |||||| || |||||||||||||| |  ||| || |||||||||||||
Sbjct: 68013 tcaccagtaatcaccacaagagcatatcccactcctaaaatgatggaa 67966
to top
>gb|BC107850.1| Homo sapiens hypothetical protein LOC652203, mRNA (cDNA clone
           MGC:111480 IMAGE:5581582), complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  gattttgattatacttttct 33
           ||||||||||||||||||||
Sbjct: 113 gattttgattatacttttct 132
to top
>gb|BC041653.1| Homo sapiens hypothetical protein FLJ10120, mRNA (cDNA clone
            IMAGE:4521778), with apparent retained intron
          Length = 3270

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 1364 gattttgattatacttttct 1383
to top
>gb|BC088375.1| Homo sapiens c114 SLIT-like testicular protein, mRNA (cDNA clone
            IMAGE:6193137)
          Length = 1660

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 1580 gattttgattatacttttct 1599
to top
>emb|AL592171.8| Human DNA sequence from clone RP13-213F13 on chromosome Xq13.2-21.2,
             complete sequence
          Length = 48698

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gattttgattatacttttct 33
             ||||||||||||||||||||
Sbjct: 27293 gattttgattatacttttct 27312
to top
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      ttatacttttctaatgaaat 41
               ||||||||||||||||||||
Sbjct: 1329492 ttatacttttctaatgaaat 1329473
to top
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence
          Length = 198470

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     gattttgattatacttttct 33
              ||||||||||||||||||||
Sbjct: 139972 gattttgattatacttttct 139991
to top
>emb|CR749232.1| Homo sapiens mRNA; cDNA DKFZp686N1231 (from clone DKFZp686N1231)
          Length = 5269

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 4783 gattttgattatacttttct 4802
to top
>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence
          Length = 114609

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 370   tggcaatcaccacaaacgcgcaggttctttgtgatc 405
             ||||||||| ||||||  || |||||||||||||||
Sbjct: 36765 tggcaatcatcacaaattcgaaggttctttgtgatc 36800
to top
>emb|CR624169.1| full-length cDNA clone CS0DC007YA17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 428

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  gattttgattatacttttct 33
           ||||||||||||||||||||
Sbjct: 332 gattttgattatacttttct 313
to top
>ref|NM_001006607.1| Homo sapiens c114 SLIT-like testicular protein (LOC474170), mRNA
          Length = 3597

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 3203 gattttgattatacttttct 3222
to top
>dbj|AK126994.1| Homo sapiens cDNA FLJ45049 fis, clone BRAWH3022347
          Length = 3857

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 3464 gattttgattatacttttct 3483
to top
>ref|NR_002940.1| Homo sapiens hypothetical protein FLJ10120 (FLJ10120) on chromosome
            17
          Length = 3270

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 1364 gattttgattatacttttct 1383
to top
>dbj|AK091733.1| Homo sapiens cDNA FLJ34414 fis, clone HEART2003168
          Length = 3082

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 2694 gattttgattatacttttct 2713
to top
>dbj|AK000982.1| Homo sapiens cDNA FLJ10120 fis, clone HEMBA1002863
          Length = 1773

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  gattttgattatacttttct 33
           ||||||||||||||||||||
Sbjct: 867 gattttgattatacttttct 886
to top
>gb|AC008837.6| Homo sapiens chromosome 5 clone CTD-2151A2, complete sequence
          Length = 108718

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    agaaaatataaacactctgc 83
             ||||||||||||||||||||
Sbjct: 92274 agaaaatataaacactctgc 92255
to top
>gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, complete sequence
          Length = 157402

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    agaaaatataaacactctgc 83
             ||||||||||||||||||||
Sbjct: 61915 agaaaatataaacactctgc 61896
to top
>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     agaaaatataaacactctgc 83
              ||||||||||||||||||||
Sbjct: 144804 agaaaatataaacactctgc 144823
to top
>ref|XM_373737.3| PREDICTED: Homo sapiens hypothetical LOC388397 (LOC388397), mRNA
          Length = 10889

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 5805 gattttgattatacttttct 5786
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      aaatcagcataacaaatgaa 57
               ||||||||||||||||||||
Sbjct: 9553081 aaatcagcataacaaatgaa 9553062
to top
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence
          Length = 226696

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     gattttgattatacttttct 33
              ||||||||||||||||||||
Sbjct: 158298 gattttgattatacttttct 158279
to top
>emb|AL928891.20| Mouse DNA sequence from clone RP23-17O9 on chromosome 2, complete
              sequence
          Length = 163057

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    cactgtggcaatcaccacaa 384
              ||||||||||||||||||||
Sbjct: 162220 cactgtggcaatcaccacaa 162201
to top
>gb|AC139677.4| Homo sapiens chromosome 17, clone RP11-1070B7, complete sequence
          Length = 179564

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gattttgattatacttttct 33
            ||||||||||||||||||||
Sbjct: 1660 gattttgattatacttttct 1641
to top
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
             complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   aactgtgaaatattagtaaagaaa 126
             ||||||||||||||| ||||||||
Sbjct: 51114 aactgtgaaatattattaaagaaa 51091
to top
>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence
          Length = 200420

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gattttgattatacttttct 33
             ||||||||||||||||||||
Sbjct: 89955 gattttgattatacttttct 89974
to top
>gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, complete sequence
          Length = 207611

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gattttgattatacttttct 33
             ||||||||||||||||||||
Sbjct: 60504 gattttgattatacttttct 60523



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gattttgattatacttttct 33
             ||||||||||||||||||||
Sbjct: 56511 gattttgattatacttttct 56530
to top
>gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, complete sequence
          Length = 183093

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     gattttgattatacttttct 33
              ||||||||||||||||||||
Sbjct: 105138 gattttgattatacttttct 105157
to top
>emb|AL824710.10| Mouse DNA sequence from clone RP23-35E16 on chromosome 2, complete
            sequence
          Length = 83371

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  cactgtggcaatcaccacaa 384
            ||||||||||||||||||||
Sbjct: 1163 cactgtggcaatcaccacaa 1144
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      aaatcagcataacaaatgaa 57
               ||||||||||||||||||||
Sbjct: 9552966 aaatcagcataacaaatgaa 9552947
to top
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aaatcagcataacaaatgaa 57
             ||||||||||||||||||||
Sbjct: 16392 aaatcagcataacaaatgaa 16373


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,751,208
Number of Sequences: 3902068
Number of extensions: 4751208
Number of successful extensions: 96619
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96287
Number of HSP's gapped (non-prelim): 332
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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