Clone Name	rbastl14a05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is...	309	3e-81
2	gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i...	303	2e-79
3	emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...	100	5e-18
4	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	100	5e-18
5	dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	5e-18
6	dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	5e-18
7	emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	100	5e-18
8	emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for pu...	82	1e-12
9	emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu...	82	1e-12
10	emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr...	74	3e-10
11	gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence	46	0.070
12	gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se...	46	0.070
13	gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s...	46	0.070
14	emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 i...	44	0.27
15	emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5...	44	0.27
16	emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ...	42	1.1
17	gb|AY110434.1| Zea mays CL533_2 mRNA sequence	42	1.1
18	gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom...	40	4.3
19	gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com...	40	4.3
20	gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome...	40	4.3
21	gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c...	40	4.3
22	gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ...	40	4.3
23	emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch...	40	4.3
24	emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr...	40	4.3
25	gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's...	40	4.3
26	emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo...	40	4.3
27	emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in...	40	4.3
28	emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in...	40	4.3
29	emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ...	40	4.3
30	gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp...	40	4.3
31	dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duc...	40	4.3
32	gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c...	40	4.3
33	gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, ...	40	4.3
34	dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome	40	4.3
35	emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro...	40	4.3
36	emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ...	40	4.3
37	emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ...	40	4.3
38	emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ...	40	4.3
39	emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i...	40	4.3
40	emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ...	40	4.3
41	emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on ch...	40	4.3
42	emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9...	40	4.3
43	gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, com...	40	4.3
44	gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, c...	40	4.3
45	emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in...	40	4.3
46	gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl...	40	4.3

---

>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  309 bits (156), Expect = 3e-81
 Identities = 159/160 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    aagccaaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgta 61
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804

                                                                        
Query: 62   accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744

                                                    
Query: 122  aataataacattggaggagacacaaaaacatcccatttga 161
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704



 Score =  212 bits (107), Expect = 5e-52
 Identities = 139/147 (94%), Gaps = 2/147 (1%)
 Strand = Plus / Minus

                                                                        
Query: 180  gccttgttcattcccgggctccagcaagagttaggccgccgtcgcc-gagagaccaaaat 238
            ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagaccaaa-t 2635

                                                                        
Query: 239  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcagaaatat 298
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaaaaatat 2575

                                       
Query: 299  acagctcaaaactggctgttgctcaca 325
            |||||||||||||||||||||||||||
Sbjct: 2574 acagctcaaaactggctgttgctcaca 2548

---

>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  303 bits (153), Expect = 2e-79
 Identities = 153/153 (100%)
 Strand = Plus / Minus

                                                                        
Query: 7    aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803

                                                                        
Query: 67   cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743

                                             
Query: 127  taacattggaggagacacaaaaacatcccattt 159
            |||||||||||||||||||||||||||||||||
Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710



 Score =  250 bits (126), Expect = 2e-63
 Identities = 141/146 (96%)
 Strand = Plus / Minus

                                                                        
Query: 180  gccttgttcattcccgggctccagcaagagttaggccgccgtcgccgagagaccaaaatc 239
            ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                        
Query: 240  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcagaaatata 299
            |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaaaaatata 2577

                                      
Query: 300  cagctcaaaactggctgttgctcaca 325
            ||||||||||||||||||||||||||
Sbjct: 2576 cagctcaaaactggctgttgctcaca 2551

---

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 103
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 104   gtgtaagaactgaaaagaaataataa 129
             ||||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 85/100 (85%), Gaps = 7/100 (7%)
 Strand = Plus / Plus

                                                                         
Query: 233   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 285
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 42261 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 42320

                                                     
Query: 286   ctcgcagaaatatacagctcaaaactggctgttgctcaca 325
             || ||| ||||||||||| |||||||||||||||||||||
Sbjct: 42321 cttgcaaaaatatacagcacaaaactggctgttgctcaca 42360

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 45       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 103
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 104      gtgtaagaactgaaaagaaataataa 129
                ||||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 85/100 (85%), Gaps = 7/100 (7%)
 Strand = Plus / Plus

                                                                            
Query: 233      caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 285
                |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 24921676 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 24921735

                                                        
Query: 286      ctcgcagaaatatacagctcaaaactggctgttgctcaca 325
                || ||| ||||||||||| |||||||||||||||||||||
Sbjct: 24921736 cttgcaaaaatatacagcacaaaactggctgttgctcaca 24921775

---

>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 103
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 104  gtgtaagaactgaaaagaaataataa 129
            ||||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 85/100 (85%), Gaps = 7/100 (7%)
 Strand = Plus / Minus

                                                                        
Query: 233  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 285
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 2639 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 2580

                                                    
Query: 286  ctcgcagaaatatacagctcaaaactggctgttgctcaca 325
            || ||| ||||||||||| |||||||||||||||||||||
Sbjct: 2579 cttgcaaaaatatacagcacaaaactggctgttgctcaca 2540

---

>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 103
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 104  gtgtaagaactgaaaagaaataataa 129
            ||||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 85/100 (85%), Gaps = 7/100 (7%)
 Strand = Plus / Minus

                                                                        
Query: 233  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 285
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 1545 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 1486

                                                    
Query: 286  ctcgcagaaatatacagctcaaaactggctgttgctcaca 325
            || ||| ||||||||||| |||||||||||||||||||||
Sbjct: 1485 cttgcaaaaatatacagcacaaaactggctgttgctcaca 1446

---

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 103
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 104   gtgtaagaactgaaaagaaataataa 129
             ||||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 85/100 (85%), Gaps = 7/100 (7%)
 Strand = Plus / Plus

                                                                         
Query: 233   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 285
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 49790 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 49849

                                                     
Query: 286   ctcgcagaaatatacagctcaaaactggctgttgctcaca 325
             || ||| ||||||||||| |||||||||||||||||||||
Sbjct: 49850 cttgcaaaaatatacagcacaaaactggctgttgctcaca 49889

---

>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar Gigante
          Length = 2599

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaacaataatcaacactcatgtaacctcgcagaaatatacagctcaaaactggctgttgc 320
            |||||||||| ||||||||| | |||| ||| ||||||||||| ||||||||||||||||
Sbjct: 2572 aaacaataatgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2513

                 
Query: 321  tcaca 325
            |||||
Sbjct: 2512 tcaca 2508

---

>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 84/99 (84%), Gaps = 7/99 (7%)
 Strand = Plus / Minus

                                                                        
Query: 234  aaaatccatggcttcttcctttcc-------tccaaacaataatcaacactcatgtaacc 286
            ||||||||||||||||| ||||||       || |||||||||| ||||||||| | |||
Sbjct: 2599 aaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgacc 2540

                                                   
Query: 287  tcgcagaaatatacagctcaaaactggctgttgctcaca 325
            | ||| ||||||||||| |||||||||||||||||||||
Sbjct: 2539 ttgcaaaaatatacagcacaaaactggctgttgctcaca 2501

---

>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 261  aaacaataatcaacactcatgtaacctcgcagaaatatacagctcaaaactggctgttgc 320
            |||||||||  ||||||||| | |||| ||| ||||||||||| ||||||||||||||||
Sbjct: 2666 aaacaataacgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2607

                 
Query: 321  tcaca 325
            |||||
Sbjct: 2606 tcaca 2602

---

>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 272 aacactcatgtaacctcgcagaaatatacagctcaaaactggctgtt 318
           ||||||||| | | |||||| || |||||||| ||||||||||||||
Sbjct: 132 aacactcatctgatctcgcaaaattatacagcccaaaactggctgtt 178



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 234 aaaatccatggcttcttcctttcc 257
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97

---

>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 144   caaaaacatcccatttgacagaagaag 170
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842

---

>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 144   caaaaacatcccatttgacagaagaag 170
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337

---

>emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 in linkage group 8,
             complete sequence
          Length = 150519

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     aaataatcttagattcagtttt 29
             ||||||||||||||||||||||
Sbjct: 27178 aaataatcttagattcagtttt 27199

---

>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 108  aagaactgaaaagaaataataacatt 133
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204

---

>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     ctacaatgctgacacgatatattgt 60
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707

---

>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 286 ctcgcagaaatatacagctcaaaactggctgtt 318
           |||||| || |||||||| ||||||||||||||
Sbjct: 600 ctcgcaaaattatacagcccaaaactggctgtt 568



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 234 aaaatccatggcttcttcctttcc 257
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649

---

>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   gaaaagaaataataacattg 134
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342

---

>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     aaattgtgtaagaactgaaa 118
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504

---

>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ccatggcttcttcctttcct 258
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503

---

>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 95     ttacaaattgtgtaagaactgaaaagaaataa 126
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665

---

>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tgaaaagaaataataacatt 133
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844

---

>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
           sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 102 ttgtgtaagaactgaaaagaaata 125
           |||||||||||||||||| |||||
Sbjct: 55  ttgtgtaagaactgaaaaaaaata 32

---

>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 102    ttgtgtaagaactgaaaagaaata 125
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398

---

>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   tgaaaagaaataataacatt 133
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606

---

>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 taagaactgaaaagaaataa 126
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620

---

>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgctgacacgatatattgt 60
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439

---

>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     atgctgacacgatatattgt 60
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776

---

>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tgaaaagaaataataacatt 133
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763

---

>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    acaaattgtgtaagaactga 116
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382

---

>dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820409O14 product:unclassifiable, full
            insert sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  cagctcaaaactggctgttg 319
            ||||||||||||||||||||
Sbjct: 2547 cagctcaaaactggctgttg 2566

---

>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gtgtaagaactgaaaagaaa 123
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855

---

>gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, complete sequence
          Length = 62355

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aagccaaaataatcttagat 21
             ||||||||||||||||||||
Sbjct: 14713 aagccaaaataatcttagat 14732

---

>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    taagaactgaaaagaaataataac 130
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724

---

>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gaaaagaaataataacattg 134
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810

---

>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgctgacacgatatattgt 60
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928

---

>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgctgacacgatatattgt 60
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824

---

>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 tgaaaagaaataataacatt 133
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379

---

>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgctgacacgatatattgt 60
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875

---

>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atgctgacacgatatattgt 60
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971

---

>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    gctcaaaactggctgttgct 321
              ||||||||||||||||||||
Sbjct: 133196 gctcaaaactggctgttgct 133215

---

>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   taacattggaggagacacaaaaac 150
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116

---

>gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, complete sequence
          Length = 154555

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    cagctcaaaactggctgttg 319
              ||||||||||||||||||||
Sbjct: 125944 cagctcaaaactggctgttg 125963

---

>gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, complete sequence
          Length = 242449

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   cagctcaaaactggctgttg 319
             ||||||||||||||||||||
Sbjct: 68402 cagctcaaaactggctgttg 68421

---

>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     atgctgacacgatatattgt 60
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096

---

>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  gaaaagaaataataacattg 134
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,744,909
Number of Sequences: 3902068
Number of extensions: 3744909
Number of successful extensions: 82640
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82510
Number of HSP's gapped (non-prelim): 124
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---