>YCF80_GUITH (O78449) Hypothetical 33.2 kDa protein ycf80|
          Length = 282

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 51  EILQTFPTKKNSRISIRSFLKYNSGCFKLIGDYMYSFIITG-SWELDSN 194
           EI        NSR+S     KY+   FK I  ++YS  +T   W L SN
Sbjct: 216 EIKNILNVNSNSRVSFHPKQKYDKNWFKGIPIFIYSPTVTNLDWTLKSN 264

>CRY2_VIBCH (Q9KS67) Cryptochrome-like protein cry2|
          Length = 504

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = -2

Query: 310 SIAGFQRMLWAYSNRASF-CNF*LRSVHRRCE----DVNLAWSSLLSSSHD 173
           S+AGF+R L A S+R  + C+F ++     CE     VN A+ SLL  S D
Sbjct: 253 SVAGFRRSLIALSSRLHWHCHF-IQKFESECEMEFRCVNRAYDSLLQQSSD 302

>FLHC_YEREN (O86047) Flagellar transcriptional activator flhC|
          Length = 193

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 375 PPTKSFKRQMTLHEFVQRQCTDLLLVSRECCGPTLIVHRFATFNSGLCT 229
           PP  +  R  TL  FV      L L    CCG T I H     NS +C+
Sbjct: 113 PPLLALTRAWTLVRFVDSGM--LQLSGCNCCGGTFITHAHQPRNSFVCS 159

>SPA12_RAT (Q8R4Z1) Serpin A12 precursor (Visceral adipose-specific serpin)|
           (Visceral adipose tissue-derived serine protease
           inhibitor) (Vaspin)
          Length = 411

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 142 EITCTVL*LQGRGNLTATMTMPN 210
           +++CT+L +  RGN+TAT  +P+
Sbjct: 254 QLSCTILEMPYRGNITATFVLPD 276

>SPA12_MOUSE (Q7TMF5) Serpin A12 precursor (Visceral adipose-specific serpin)|
           (Visceral adipose tissue-derived serine protease
           inhibitor) (Vaspin)
          Length = 413

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 142 EITCTVL*LQGRGNLTATMTMPN 210
           +++CT+L +  RGN+TAT  +P+
Sbjct: 254 QLSCTILEIPYRGNITATFVLPD 276

>Y085_BUCBP (Q89AY5) Hypothetical UPF0011 protein bbp_085|
          Length = 292

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 27  KSLALVTTEILQTFPTKKNSRISIRSFLKYNSGCFKLIGDYMYSFIITGSWELDSNDD 200
           K+  L++  +L+T    K + +S    +K  +G +KL  +Y+Y++ I  +  +  N+D
Sbjct: 236 KNTNLISDAVLKTLKILK-THLSFNKAIKITAGIYKLPKNYLYNYAINNT--ISKNND 290

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 242 ELKVAKRCTIRVGPQHSLETSNRSVHCL 325
           ++K AK   + +GP   + T+NR++ C+
Sbjct: 388 DVKTAKSMKVDIGPTRWIPTANRTIRCI 415

>PBPA_VIBCH (Q9KNU5) Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes:|
           Penicillin-insensitive transglycosylase (EC 2.4.2.-)
           (Peptidoglycan TGase); Penicillin-sensitive
           transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
          Length = 825

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +3

Query: 111 KYNSGCFKLIGDYMYSFIITGSWELDSNDDHAKFTSSHRLCTDLS*KLQNDARLE*AHSI 290
           KY+    +L   Y+    I  +W ++   + A +TS   + T +  KLQ  A        
Sbjct: 251 KYHGAEIELNAPYVAE--IARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN------- 301

Query: 291 LWKPAIDQYIAFEQTHG 341
             + AI+  +A+++ HG
Sbjct: 302 --QAAINNLLAYDERHG 316

>SWI6_KLULA (P40418) Regulatory protein SWI6 (Cell-cycle box factor, chain|
           SWI6) (Trans-acting activator of HO endonuclease gene)
           (MBF subunit P90)
          Length = 769

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 93  SIRSFLKYNSGCFKLIGDYMYSFII 167
           S++S   Y+SG F+++ DY+Y  I+
Sbjct: 327 SVKSVNNYDSGTFEILLDYLYPCIV 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,859,678
Number of Sequences: 219361
Number of extensions: 1007885
Number of successful extensions: 2014
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)