Clone Name | rbastl13g11 |
---|---|
Clone Library Name | barley_pub |
>ATE_BRUSU (P63647) Putative arginyl-tRNA--protein transferase (EC 2.3.2.8)| (R-transferase) (Arginyltransferase) Length = 249 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 13/62 (20%) Frame = +2 Query: 20 FLTCHIQSNCLDPYMVVTHVCGVQGA------FGYWMQ-------PVRDGSTNHVQPNGW 160 F + H+Q L YM++ H+ + A GYW++ +R H+ P GW Sbjct: 185 FFSPHMQERSLGTYMILDHIERARAAGLPHVYLGYWVEGSRKMQYKIRFTPQEHLGPRGW 244 Query: 161 QQ 166 Q+ Sbjct: 245 QR 246
>ATE_BRUME (P63646) Putative arginyl-tRNA--protein transferase (EC 2.3.2.8)| (R-transferase) (Arginyltransferase) Length = 249 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 13/62 (20%) Frame = +2 Query: 20 FLTCHIQSNCLDPYMVVTHVCGVQGA------FGYWMQ-------PVRDGSTNHVQPNGW 160 F + H+Q L YM++ H+ + A GYW++ +R H+ P GW Sbjct: 185 FFSPHMQERSLGTYMILDHIERARAAGLPHVYLGYWVEGSRKMQYKIRFTPQEHLGPRGW 244 Query: 161 QQ 166 Q+ Sbjct: 245 QR 246
>HUT1_KLULA (Q6CR04) UDP-galactose transporter homolog 1| Length = 339 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 215 KIWPRMACNFHLFF*AFVFQLNLALYLNLFVYIKW 319 ++WP C F + + + Q +A+ L +YIKW Sbjct: 32 RVWPNSGCTFQVPYIVALVQATIAMICGL-IYIKW 65
>G3ST2_PIG (Q6XQG9) Galactose 3-O-sulfotransferase 2 (EC 2.8.2.-) (Gal3ST-2)| (Galbeta1-3GalNAc 3'-sulfotransferase 2) (Beta-galactose-3-O-sulfotransferase 2) Length = 398 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 79 LRSPGSVWLLDATGERRQHKPCSTEW 156 LRSPGSV L G+ R + C+ +W Sbjct: 256 LRSPGSVTSLTPEGQERAKRWCALDW 281
>PLCG1_HUMAN (P19174) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +3 Query: 15 NNFLHVIYKAIAWIRTWSLLTSAESRERLVTGCNR*ETAAQTMFNRMDGSKL 170 NN L V ++A + WSL +A+S+E L + AQT R+ K+ Sbjct: 891 NNRLFVFSISMASVAHWSLDVAADSQEELQDWVKKIREVAQTADARLTEGKI 942
>PLCG1_BOVIN (P08487) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1291 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +3 Query: 15 NNFLHVIYKAIAWIRTWSLLTSAESRERLVTGCNR*ETAAQTMFNRMDGSKL 170 NN L V ++A + WSL +A+S+E L + AQT R+ K+ Sbjct: 891 NNRLFVFSISMASVAHWSLDVAADSQEELQDWVKKIREVAQTADARLTEGKM 942
>MYLK_MOUSE (Q6PDN3) Myosin light chain kinase, smooth muscle and non-muscle| isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin (Kinase-related protein) (KRP)] Length = 1941 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 186 RHHSLRLIWPRYGQGW 233 RH +LR WP GQGW Sbjct: 833 RHGTLRPCWPARGQGW 848 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,282,299 Number of Sequences: 219361 Number of extensions: 1025771 Number of successful extensions: 2149 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2149 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)