>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 48    gcttggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggtta 105
             |||| ||||||||||||||| ||||||||  |||||||  ||||||||| ||||||||
Sbjct: 15697 gctttgatccgtacatggtcattactcactcctgcggaaaccagggagcctttggtta 15640

>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 98     tttggttactggatgcaaccggtgagagacggcagcac 135
              |||||||||||| ||||||||||| ||||||| |||||
Sbjct: 243799 tttggttactgggtgcaaccggtgggagacggtagcac 243762

>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence
          Length = 142018

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 48    gcttggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttact 107
             |||||||||||||| ||| | ||||||||  ||  ||| |||||||||| |||| |||||
Sbjct: 88128 gcttggatccgtacgtggcccttactcactcctatggactccagggagcctttgattact 88187

                       
Query: 108   ggatgcaacc 117
             || |||||||
Sbjct: 88188 gggtgcaacc 88197

>gb|AY613782.1| Aegilops tauschii isolate TA2468 clone 2 HCBT-like putative PR
           gene, partial cds
          Length = 6062

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 47  tgcttggatccgtacatggtcgttac 72
           ||||||||||||||||||||||||||
Sbjct: 567 tgcttggatccgtacatggtcgttac 592



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 51  tggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgga 110
           ||||||||||| ||||| ||||||||  ||   || || ||||||| |||||||||||| 
Sbjct: 121 tggatccgtacgtggtccttactcactcctatagactctagggagcctttggttactggg 62

                                    
Query: 111 tgcaaccggtgagagacggcagcac 135
           ||||||| ||| |||| || |||||
Sbjct: 61  tgcaaccagtgggagatggtagcac 37

>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 47    tgcttggatccgtacatggtcgttac 72
             ||||||||||||||||||||||||||
Sbjct: 38933 tgcttggatccgtacatggtcgttac 38958



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 51    tggatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgga 110
             ||||||||||| ||||| ||||||||  ||   || || ||||||| |||||||||||| 
Sbjct: 38488 tggatccgtacgtggtccttactcactcctatagactctagggagcctttggttactggg 38429

                                      
Query: 111   tgcaaccggtgagagacggcagcac 135
             ||||||| ||| |||| || |||||
Sbjct: 38428 tgcaaccagtgggagatggtagcac 38404

>emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glucose pyrophosphorylase large
           subunit
          Length = 7725

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 82  cggagtccagggagcgtttggttactggat 111
           ||||| ||||||||||||||||||||||||
Sbjct: 352 cggaggccagggagcgtttggttactggat 323

>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 53    gatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgg 109
             ||||| ||||||||| ||||||||  |||||||   |||||||| ||||||||||||
Sbjct: 59197 gatccatacatggtcattactcactcctgcggaaatcagggagcctttggttactgg 59253

>gb|AF509767.1| Hordeum vulgare subsp. vulgare isolate NRG021 Rpg1 region, genomic
            sequence
          Length = 2112

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 57   cgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactgg 109
            ||||||||||||||||||||  ||||||   | ||||||| ||||||||||||
Sbjct: 1352 cgtacatggtcgttactcactcctgcggcaactagggagcctttggttactgg 1300

>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds
          Length = 20754

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 83   ggagtccagggagcgtttggttactggat 111
            |||| ||||||||||||||||||||||||
Sbjct: 2797 ggaggccagggagcgtttggttactggat 2825

>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds,
            cultivar:Igri
          Length = 11684

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 53   gatccgtacatggtcgttactcacgtctgcggagtccagggagcgtttggttactg 108
            |||||||||| |||||||||||||  | ||||   ||||||||| |||||||||||
Sbjct: 4692 gatccgtacacggtcgttactcactcccgcggcaaccagggagcttttggttactg 4637

>gb|AF509748.1| Hordeum vulgare subsp. vulgare Morex barley stem rust resistance
            protein (Rpg1) gene, complete cds
          Length = 17974

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 53   gatccgtacatggtcgttact 73
            |||||||||||||||||||||
Sbjct: 1282 gatccgtacatggtcgttact 1262



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  ataaaatggctgcatgcatc 330
            ||||||||||||||||||||
Sbjct: 5272 ataaaatggctgcatgcatc 5253

>gb|AC010347.4| Homo sapiens chromosome 5 clone CTD-2018C9, complete sequence
          Length = 146638

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   gtctgagattgatatggccaa 216
             |||||||||||||||||||||
Sbjct: 67599 gtctgagattgatatggccaa 67579

>dbj|AB073930.1| Thermoanaerobacter brockii treP gene for trehalose phosphorylase,
            complete cds
          Length = 3345

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  gcctttgtgttccagttgaac 280
            |||||||||||||||||||||
Sbjct: 3115 gcctttgtgttccagttgaac 3135

>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 82     cggagtccagggagcgtttggttactgg 109
              ||||| ||||||||| ||||||||||||
Sbjct: 184469 cggaggccagggagcatttggttactgg 184442

>gb|AY809729.1| Schistosoma japonicum SJCHGC07439 protein mRNA, partial cds
          Length = 627

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   acaacaacagcttcaacaat 20
           ||||||||||||||||||||
Sbjct: 146 acaacaacagcttcaacaat 165

>gb|AC124196.4| Mus musculus BAC clone RP23-296L12 from chromosome 13, complete sequence
          Length = 193553

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    ttgatatggccaagatatggccaa 227
              ||||||||||||| ||||||||||
Sbjct: 118451 ttgatatggccaatatatggccaa 118428

>emb|X52103.1|TAEMG T.aestivum Em gene
          Length = 2465

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 311 ataaaatggctgcatgcatc 330
           ||||||||||||||||||||
Sbjct: 824 ataaaatggctgcatgcatc 843

>emb|CR723903.2|CNS0GLID Tetraodon nigroviridis full-length cDNA
          Length = 826

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttgtgttccagttgaacc 281
           ||||||||||||||||||||
Sbjct: 620 ctttgtgttccagttgaacc 601

>emb|CR721310.2|CNS0GJIC Tetraodon nigroviridis full-length cDNA
          Length = 857

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttgtgttccagttgaacc 281
           ||||||||||||||||||||
Sbjct: 646 ctttgtgttccagttgaacc 627

>emb|CR718373.2|CNS0GH8R Tetraodon nigroviridis full-length cDNA
          Length = 850

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttgtgttccagttgaacc 281
           ||||||||||||||||||||
Sbjct: 646 ctttgtgttccagttgaacc 627

>emb|CR679853.2|CNS0FNIX Tetraodon nigroviridis full-length cDNA
          Length = 827

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttgtgttccagttgaacc 281
           ||||||||||||||||||||
Sbjct: 621 ctttgtgttccagttgaacc 602

>emb|CR647884.2|CNS0EYVM Tetraodon nigroviridis full-length cDNA
          Length = 824

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ctttgtgttccagttgaacc 281
           ||||||||||||||||||||
Sbjct: 629 ctttgtgttccagttgaacc 610

>emb|AL136442.12| Human DNA sequence from clone RP11-25J23 on chromosome 13 Contains the
             3' end of a novel gene (KIAA1165) (likely ortholog of
             mouse Nedd4 WW domain-binding protein 5A) and a novel
             gene, complete sequence
          Length = 157695

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acaacaacagcttcaacaat 20
             ||||||||||||||||||||
Sbjct: 99203 acaacaacagcttcaacaat 99222

>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE
          Length = 117135

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     acaacagcttcaacaatttc 23
             ||||||||||||||||||||
Sbjct: 72710 acaacagcttcaacaatttc 72729

>emb|BX548068.13| Zebrafish DNA sequence from clone DKEYP-53E7 in linkage group 10,
            complete sequence
          Length = 177449

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ctttatttgaacttgtttgt 306
            ||||||||||||||||||||
Sbjct: 3945 ctttatttgaacttgtttgt 3926

>emb|BX284111.7| Mouse DNA sequence from clone RP23-217B8 on chromosome X, complete
             sequence
          Length = 223318

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   atagtctgagattgatatgg 212
             ||||||||||||||||||||
Sbjct: 83462 atagtctgagattgatatgg 83443

>emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chromosome 4, complete
             sequence
          Length = 216639

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   tgagagacggcagcacaaaccatg 143
             ||||| ||||||||||||||||||
Sbjct: 58272 tgagaaacggcagcacaaaccatg 58249


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,851,321
Number of Sequences: 3902068
Number of extensions: 2851321
Number of successful extensions: 58247
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58199
Number of HSP's gapped (non-prelim): 45
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)