Clone Name | rbastl13g09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RL24_MYCGE (P47408) 50S ribosomal protein L24 | 29 | 2.5 | 2 | NK2R_CAVPO (Q64077) Substance-K receptor (SKR) (Neurokinin A rec... | 28 | 7.3 |
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>RL24_MYCGE (P47408) 50S ribosomal protein L24| Length = 108 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 171 SKITLHTNNQTNRRNHITRITVNLQAFPITKINLFLQ 281 +K+T+H Q N+R+ T T P+ K+ LF Q Sbjct: 40 NKVTVHKKEQVNKRSKQTNPTTKEAPLPLNKLALFDQ 76
>NK2R_CAVPO (Q64077) Substance-K receptor (SKR) (Neurokinin A receptor) (NK-2| receptor) (NK-2R) (Tachykinin receptor 2) Length = 402 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 238 LTVILVIWLRRFV*LFVCKVILLVTVW--LLGSFVDYGKCLSYFNLSFQPVKCLLLPAQS 65 L VI++I+L +FV I+ +T+W + +G L + + VK ++L + Sbjct: 199 LVVIVLIYLLPLTVMFVAYSIIGLTLWRRAVPRHQAHGANLRHLQAKKKFVKTMVLVVVT 258 Query: 64 LRICW 50 ICW Sbjct: 259 FAICW 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,597,886 Number of Sequences: 219361 Number of extensions: 918265 Number of successful extensions: 1610 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1608 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)