Clone Name | rbastl13g08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 0.75 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aaaaatcattctcattcaca 28 |||||||||||||||||||| Sbjct: 1053708 aaaaatcattctcattcaca 1053689
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 0.75 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aaaaatcattctcattcaca 28 |||||||||||||||||||| Sbjct: 82235 aaaaatcattctcattcaca 82216
>gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosome 9, complete sequence Length = 189336 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 actaaagctttgagctatt 46 ||||||||||||||||||| Sbjct: 157483 actaaagctttgagctatt 157501
>gb|DQ175821.1| Hordeum vulgare clone DsB11 Ds insertion site flanking region genomic sequence Length = 950 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 agctttgagctattgttac 51 ||||||||||||||||||| Sbjct: 224 agctttgagctattgttac 206
>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete sequence Length = 168789 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 actaaagctttgagctatt 46 ||||||||||||||||||| Sbjct: 35836 actaaagctttgagctatt 35854
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 38.2 bits (19), Expect = 3.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 aaaaaatcattctcattcacact 30 ||||||||||||||||| ||||| Sbjct: 67783 aaaaaatcattctcattaacact 67761
>emb|AL133552.8| Human DNA sequence from clone RP11-67B16 on chromosome 10 Contains a novel gene, complete sequence Length = 80955 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gaggaaaaaatcattctca 22 ||||||||||||||||||| Sbjct: 50902 gaggaaaaaatcattctca 50920
>gb|AY946225.1| Hordeum vulgare subsp. vulgare 5' flanking sequence from Ds insertion in TNP-30 Length = 753 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 agctttgagctattgttac 51 ||||||||||||||||||| Sbjct: 151 agctttgagctattgttac 169
>emb|AL161665.5|CNS01RH9 Human chromosome 14 DNA sequence BAC R-431H16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172993 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aaaaaatcattctcattca 26 ||||||||||||||||||| Sbjct: 97500 aaaaaatcattctcattca 97518
>gb|AC132834.4| Homo sapiens chromosome 8, clone CTD-2344M9, complete sequence Length = 156318 Score = 38.2 bits (19), Expect = 3.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 gggaggaaaaaatcattct 20 ||||||||||||||||||| Sbjct: 105051 gggaggaaaaaatcattct 105033 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 668,490 Number of Sequences: 3902068 Number of extensions: 668490 Number of successful extensions: 43089 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43064 Number of HSP's gapped (non-prelim): 25 length of query: 74 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 53 effective length of database: 17,151,101,840 effective search space: 909008397520 effective search space used: 909008397520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)