Clone Name | rbastl13g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DHSU_CHRVI (Q06530) Sulfide dehydrogenase [flavocytochrome c] fl... | 33 | 0.24 | 2 | MUG1_MOUSE (P28665) Murinoglobulin-1 precursor (MuG1) | 32 | 0.40 | 3 | ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein ... | 27 | 10.0 |
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>DHSU_CHRVI (Q06530) Sulfide dehydrogenase [flavocytochrome c] flavoprotein| chain precursor (EC 1.8.2.-) (FC) (FCSD) (Flavocytochrome c flavoprotein subunit) Length = 431 Score = 32.7 bits (73), Expect = 0.24 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 21 YKGIHELQQPCILNHRPSSGWQAERQGELS 110 +KGIH + CI N P SG+ A QG+++ Sbjct: 316 HKGIHVIGDACIANPMPKSGYSANSQGKVA 345
>MUG1_MOUSE (P28665) Murinoglobulin-1 precursor (MuG1)| Length = 1476 Score = 32.0 bits (71), Expect = 0.40 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 236 DHSVSSFCSYM*CCIWMHLRASHVTFSVYTMSK 138 +H CSY C H A HV ++VY++SK Sbjct: 414 NHKEEDSCSYFYCMEERHASAKHVAYAVYSLSK 446
>ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein C47)| Length = 405 Score = 27.3 bits (59), Expect = 10.0 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = -1 Query: 162 LFCLHHEQAYVVALSWVKRVHLVSLPATHWMVD 64 LFC HH + + ++ + +VH +P ++VD Sbjct: 247 LFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVD 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,144,696 Number of Sequences: 219361 Number of extensions: 864487 Number of successful extensions: 1800 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1784 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1800 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)