Clone Name | rbastl13g06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 catgatatcattaccactttat 299 |||||||||||||||||||||| Sbjct: 16841500 catgatatcattaccactttat 16841521
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 catgatatcattaccactttat 299 |||||||||||||||||||||| Sbjct: 54865 catgatatcattaccactttat 54886
>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete sequence Length = 175382 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 ttgaaatgaccaggaaacaga 188 ||||||||||||||||||||| Sbjct: 11784 ttgaaatgaccaggaaacaga 11764
>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3, complete sequence Length = 93805 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 acaaccacatgatatcattac 291 ||||||||||||||||||||| Sbjct: 55914 acaaccacatgatatcattac 55934
>gb|AC150532.2| Bos taurus BAC CH240-105A12 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186851 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 caattttgattccatcttgt 130 |||||||||||||||||||| Sbjct: 176981 caattttgattccatcttgt 177000
>gb|AC149716.2| Bos taurus BAC CH240-31B10 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171707 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 caattttgattccatcttgt 130 |||||||||||||||||||| Sbjct: 104441 caattttgattccatcttgt 104422
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence Length = 120704 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gagtcaaaaattggatagag 238 |||||||||||||||||||| Sbjct: 25025 gagtcaaaaattggatagag 25044
>gb|AC023136.6| Homo sapiens BAC clone RP11-497K21 from 4, complete sequence Length = 185593 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 acaaccacatgatatcatta 290 |||||||||||||||||||| Sbjct: 5129 acaaccacatgatatcatta 5110
>gb|AC015921.20| Homo sapiens chromosome 17, clone CTD-3060P21, complete sequence Length = 140386 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaataaaataggtcatttcc 27 |||||||||||||||||||| Sbjct: 19715 aaataaaataggtcatttcc 19734 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,167,038 Number of Sequences: 3902068 Number of extensions: 3167038 Number of successful extensions: 56121 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56093 Number of HSP's gapped (non-prelim): 28 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)