>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein|
            Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270)
          Length = 3224

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 17/89 (19%)
 Frame = +2

Query: 47   LVNNATNITPSDDFCVKLNGIFPILLVYAA-----CPPLPS--CCLFSLAIHGPASLL-- 199
            L+  A N+TP+      +N + P   +YA       PP+ S   C+FS  ++GP +L   
Sbjct: 888  LLRPAANVTPTKGPVYGMNRLPPQQHIYAYPQQMHTPPVQSSSACMFSQEMYGPPALRFE 947

Query: 200  --------PVGEDGLQILVQRLGLGPPLP 262
                    P G+D     VQ+    PPLP
Sbjct: 948  SPATGILSPRGDDYFNYNVQQTSTNPPLP 976

>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)|
          Length = 3053

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 16/88 (18%)
 Frame = +2

Query: 47   LVNNATNITPSDDFCVKLNGIFPILLVYAAC-----PPLPS--CCLFSLAIHGP------ 187
            L+  A N+TP+      +N + P   +YA       PP+ S   C+FS  ++GP      
Sbjct: 888  LLRPAANVTPTKGPVYGMNRLPPQQHIYAYSQQMHTPPVQSSSACMFSQEMYGPPLRFES 947

Query: 188  ---ASLLPVGEDGLQILVQRLGLGPPLP 262
                 L P G+D     VQ+    PPLP
Sbjct: 948  PATGILSPRGDDYFNYNVQQTSTNPPLP 975

>ATP8_LOXNO (Q9MDJ1) ATP synthase protein 8 (EC 3.6.3.14) (ATPase subunit 8)|
           (A6L)
          Length = 55

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 148 PLMLLILTCNPWTRKPATCWRRWPPNPCTAPWTWAST 258
           P +L  +T NP + KP       P  P T PWTW  T
Sbjct: 26  PKLLTFVTMNPPSNKP-------PIAPSTTPWTWPWT 55

>Y6509_BACAN (Q9RN22) Hypothetical protein pXO2-10/BXB0009/GBAA_pXO2_0009|
          Length = 224

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 97  IKRHISYITSICSVSPPPLMLLILTCNPWTRKPATCWRR 213
           +KR ++ +TS+C V   P  +L LT +  T +    W+R
Sbjct: 87  LKRFMNQLTSLCRVYHEPFKILSLTYSTETTEQQVYWKR 125

>NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
            (Nrap)
          Length = 1141

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 131  AACPPLPSCCLFSLAIHGPASLLPV-GEDGLQILVQRL 241
            A  PP+ S C   LA  GP+SL+PV G D  Q+ + +L
Sbjct: 1020 AVDPPVASFCRGLLAEPGPSSLMPVLGYDPPQLYLAQL 1057

>ATS14_HUMAN (Q8WXS8) ADAMTS-14 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 14) (ADAM-TS
            14) (ADAM-TS14)
          Length = 1223

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +1

Query: 178  PWTRKPATCWRRWPPNPCTAPWTWASTP 261
            P T  P   W   P  P   PW W  TP
Sbjct: 1168 PETPIPGASWSISPTTPGGLPWGWTQTP 1195

>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor|
           (Stranded at second protein)
          Length = 1693

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 65  NITPSDDFCVKLNGIFPILLVYAACPPLPSCCLFSLAIH-GPASLLPVGED 214
           N+T  D  C   NG        AACPP+P+     L  H   A LLP+ +D
Sbjct: 846 NLTGCDQHCYCENGRVECR---AACPPVPALPPADLPCHPALARLLPIPDD 893

>YI61_XANCV (P25438) Insertion element IS476 hypothetical 39.2 kDa protein|
          Length = 346

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 258 SGGPSPRRCTRIWRPSSPTGSRLAGPWIASENKQHEGRGGH 136
           SGGPS    T  WRP+     R  GP  + E     G  GH
Sbjct: 10  SGGPS----TGGWRPTRQAAERTGGPEHSIEEVAGRGAPGH 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,522,246
Number of Sequences: 219361
Number of extensions: 838582
Number of successful extensions: 2577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2576
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)