>SUMF1_MOUSE (Q8R0F3) Sulfatase-modifying factor 1 precursor|
           (C-alpha-formyglycine-generating enzyme 1)
          Length = 372

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 280 EHANGSAGL*TRGICGCWTSCEANSDGGKIAVNHLSRAASQPRL 149
           E   G+A L   G CGC T   A + G   A    SR A+ P L
Sbjct: 36  EAREGAASL--AGSCGCGTPQRAGAHGSSAAAQRYSREANAPGL 77

>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 198  PPSEFASQEVQHPHIPLV*SPALPLACSGTW 290
            PPS+F  Q  QH    L   P  P  CSG W
Sbjct: 1357 PPSKFFKQVEQHYLTQLTAQPIPPEMCSGWW 1387

>VIT1_PERAM (Q9U8M0) Vitellogenin 1 precursor (Vg-1)|
          Length = 1896

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 209  ICFAGSPAPAYSPGLEPSAAVGMFRDLDCFTKGP 310
            ICF+  P P  +P  +P+  +       C TKGP
Sbjct: 1826 ICFSMRPLPECAPRFKPADTLKKKIKFHCLTKGP 1859

>PAX6_XENLA (P55864) Paired box protein Pax-6|
          Length = 422

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 288 RSRNMPTAALGSRPGEYAGAGLPAKQIQ 205
           R  N  TA  GSRPG Y G  +P +  Q
Sbjct: 147 RMLNGQTATWGSRPGWYPGTSVPGQPAQ 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,411,006
Number of Sequences: 219361
Number of extensions: 1028902
Number of successful extensions: 2704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2704
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)