>gb|AC107397.5| Homo sapiens BAC clone RP11-703C14 from 4, complete sequence
          Length = 96372

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    attgtttctttagcagtataagaag 73
             ||||||||||||||||||| |||||
Sbjct: 48695 attgtttctttagcagtattagaag 48719

>gb|AC093769.3| Homo sapiens BAC clone RP11-114I18 from 2, complete sequence
          Length = 58221

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    atattgtttctttagcagtat 67
             |||||||||||||||||||||
Sbjct: 26942 atattgtttctttagcagtat 26922

>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0008H02, complete sequence
          Length = 143438

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cacagcgatttttcctccat 204
             ||||||||||||||||||||
Sbjct: 21032 cacagcgatttttcctccat 21051

>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07,
              complete sequence
          Length = 157463

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    cacagcgatttttcctccat 204
              ||||||||||||||||||||
Sbjct: 107349 cacagcgatttttcctccat 107368

>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14, complete
              sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aaacactgccatgcagtata 26
              ||||||||||||||||||||
Sbjct: 132781 aaacactgccatgcagtata 132800

>emb|AL031779.5|HS445N2 Human DNA sequence from clone RP3-445N2 on chromosome 6p12.1-21.1
             Contains the 5' end of the COL21A1 gene for collagen, type
             XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1,
             COLA1L, COL20A1, DKFZp564B052) and part of a novel gene,
             complete sequence
          Length = 101010

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   acaaacttaacaggaaaact 130
             ||||||||||||||||||||
Sbjct: 37402 acaaacttaacaggaaaact 37383

>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene,
             complete cds, alternatively spliced
          Length = 381696

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   acaaacttaacaggaaaact 130
             ||||||||||||||||||||
Sbjct: 13654 acaaacttaacaggaaaact 13635

>gb|U23376.1|LLU23376 Lactococcus lactis N5-(1-carboxyethyl)-L-ornithine synthase (ceo)
           gene, complete cds
          Length = 3421

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 caaacttaacaggaaaactt 131
           ||||||||||||||||||||
Sbjct: 555 caaacttaacaggaaaactt 574

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     catgttccgggacctggact 293
               ||||||||||||||||||||
Sbjct: 3386027 catgttccgggacctggact 3386046

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      cacagcgatttttcctccat 204
                ||||||||||||||||||||
Sbjct: 17513335 cacagcgatttttcctccat 17513354

>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence
          Length = 220527

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aaacactgccatgcagtata 26
             ||||||||||||||||||||
Sbjct: 18608 aaacactgccatgcagtata 18627

>dbj|AK120224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041O14, full
           insert sequence
          Length = 2124

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 cacagcgatttttcctccat 204
           ||||||||||||||||||||
Sbjct: 654 cacagcgatttttcctccat 635

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      cacagcgatttttcctccat 204
                ||||||||||||||||||||
Sbjct: 17607045 cacagcgatttttcctccat 17607064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,045,648
Number of Sequences: 3902068
Number of extensions: 3045648
Number of successful extensions: 56824
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56756
Number of HSP's gapped (non-prelim): 68
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)