Clone Name | rbastl13f07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 563 bits (284), Expect = e-157 Identities = 293/296 (98%) Strand = Plus / Minus Query: 1 ccaggggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtact 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 ccagtggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtact 1174 Query: 61 gtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgcccttta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 gtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgcccttta 1114 Query: 121 ttcatccatggttgccgatggtttaaattaaatggagatgctgttggggatgcccttggc 180 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 1113 ttcatccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggc 1054 Query: 181 ggtaagcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtaggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ggtaagcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtaggg 994 Query: 241 aaacttagccgggccgttgcggttcttgagctccgggtcatggttcatgcccacca 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 aaacttagccgggccgttgcggttcttgagctccgggtcatggttcatgcccacca 938
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 553 bits (279), Expect = e-154 Identities = 288/291 (98%) Strand = Plus / Minus Query: 6 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740 Query: 66 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680 Query: 126 ccatggttgccgatggtttaaattaaatggagatgctgttggggatgcccttggcggtaa 185 |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620 Query: 186 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 2560 Query: 246 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccacca 296 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2559 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccacca 2509
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 184 bits (93), Expect = 1e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttcaacagc 630 Query: 272 tccgggtcatggttcatgcccacca 296 | |||||| |||||||||||||||| Sbjct: 629 tgcgggtcgtggttcatgcccacca 605
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 157 bits (79), Expect = 2e-35 Identities = 124/139 (89%) Strand = Plus / Plus Query: 158 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 217 |||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60 Query: 218 ttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 277 || |||||||||||||||||||| | ||| |||||||||||||||||| |||| |||| Sbjct: 61 ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttcaacagctgcggg 120 Query: 278 tcatggttcatgcccacca 296 || |||||||||||||||| Sbjct: 121 tcgtggttcatgcccacca 139
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 129 bits (65), Expect = 5e-27 Identities = 125/145 (86%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||| || ||||| | || |||| |||||||| Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||| Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagc 783 Query: 272 tccgggtcatggttcatgcccacca 296 |||||| ||||||| |||||| Sbjct: 782 cgcgggtccccgttcatggccacca 758
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 129 bits (65), Expect = 5e-27 Identities = 107/121 (88%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 209 |||||||||||||||| || |||||||||||||| | ||||| ||| ||||||| || Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgt 2561 Query: 210 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 269 ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| Sbjct: 2560 cggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttga 2501 Query: 270 g 270 | Sbjct: 2500 g 2500
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 129 bits (65), Expect = 5e-27 Identities = 125/145 (86%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2001 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||||||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2000 gaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 1941 Query: 272 tccgggtcatggttcatgcccacca 296 | |||||| ||||| |||||||| Sbjct: 1940 tgcgggtcgcggttctcgcccacca 1916
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 123 bits (62), Expect = 3e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 155 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 214 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 2594 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 2535 Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 2534 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 2475 Query: 275 gggtcatggttcatgcccacca 296 | ||| |||||||||||||| Sbjct: 2474 gcgtcgccgttcatgcccacca 2453
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 123 bits (62), Expect = 3e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 155 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 214 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 47230 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 47171 Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 47170 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 47111 Query: 275 gggtcatggttcatgcccacca 296 | ||| |||||||||||||| Sbjct: 47110 gcgtcgccgttcatgcccacca 47089 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 65812 atggagatgctgttggggatgcccatggcggtgagccc 65775 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 3e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 155 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 214 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 27803100 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27803041 Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 27803040 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 27802981 Query: 275 gggtcatggttcatgcccacca 296 | ||| |||||||||||||| Sbjct: 27802980 gcgtcgccgttcatgcccacca 27802959 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 30026385 gaggtgtttgggtagagcagcgtgtaggg 30026357 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27821682 atggagatgctgttggggatgcccatggcggtgagccc 27821645 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 aaatggagatgctgttggggatgccctt 177 |||||| ||||||||||||||||||||| Sbjct: 14300020 aaatggtgatgctgttggggatgccctt 14300047
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 3e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 155 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 214 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 27894424 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27894365 Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 27894364 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 27894305 Query: 275 gggtcatggttcatgcccacca 296 | ||| |||||||||||||| Sbjct: 27894304 gcgtcgccgttcatgcccacca 27894283 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 30117807 gaggtgtttgggtagagcagcgtgtaggg 30117779 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27913006 atggagatgctgttggggatgcccatggcggtgagccc 27912969 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 aaatggagatgctgttggggatgccctt 177 |||||| ||||||||||||||||||||| Sbjct: 14294995 aaatggtgatgctgttggggatgccctt 14295022
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 123 bits (62), Expect = 3e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 155 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggag 214 ||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| Sbjct: 10793 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 10852 Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| ||||||||||| || |||| || ||||| ||||||||||||||| || Sbjct: 10853 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagcccc 10912 Query: 275 gggtcatggttcatgcccacca 296 | ||| |||||||||||||| Sbjct: 10913 gcgtcgccgttcatgcccacca 10934
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 4599 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 4598 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 4539 Query: 272 tccgggtcatggttcatgcccacca 296 | |||||| ||||| |||||||| Sbjct: 4538 tgcgggtcgcggttctcgcccacca 4514
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 121 bits (61), Expect = 1e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2532 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2531 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 2472 Query: 272 tccgggtcatggttcatgcccacca 296 | |||||| ||||| |||||||| Sbjct: 2471 tgcgggtcgcggttctcgcccacca 2447
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 792 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 733 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 732 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 674
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 117 bits (59), Expect = 2e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 ||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggg 2521
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 2631 gaggtgtttgggtagagcagcgtgtaggg 2603
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 81366 gaggtgtttgggtagagcagcgtgtaggg 81394
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 113 bits (57), Expect = 3e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665 Query: 212 gaggtgttggggtagagcagcatgtaggg 240 |||||||| |||||||||||| ||||||| Sbjct: 2664 gaggtgtttgggtagagcagcgtgtaggg 2636
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 97.6 bits (49), Expect = 2e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 211 ||||| |||||||| ||||||||| ||||||| ||||| | || ||| |||||||| Sbjct: 2654 atggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcg 2595 Query: 212 gaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 |||||||| ||||||||||||||||| || ||||| ||||| ||| |||||||||| ||| Sbjct: 2594 gaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctttagc 2535 Query: 272 tccgggtcatggttcatgcccacca 296 | |||||| ||||||| |||||| Sbjct: 2534 tgcgggtccgagttcatggccacca 2510
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 274 ||||||||||| |||||||||||||| | ||| | || ||||| |||||||||||| || Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635 Query: 275 gggtcatggttcatg 289 ||||| | ||||||| Sbjct: 2634 gggtccttgttcatg 2620 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 ||||||| |||||||||||||||| ||||||| ||||| Sbjct: 2760 atggagacgctgttggggatgcccatggcggtgagccc 2723
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2442 atggagatgctgttggggatgcccatggcggtgagccc 2405 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2921 atggagatgctgttggggatgcccatggcggtgagccc 2884 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2915 atggagatgctgttggggatgcccatggcggtgagccc 2878 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1328 atggagatgctgttggggatgcccatggcggtgagccc 1291 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2593 atggagatgctgttggggatgcccatggcggtgagccc 2556 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2923 atggagatgctgttggggatgcccatggcggtgagccc 2886 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1493 atggagatgctgttggggatgcccatggcggtgagccc 1456 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 271 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggc 180 ||||||||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524 Score = 48.1 bits (24), Expect = 0.016 Identities = 48/56 (85%) Strand = Plus / Minus Query: 215 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgag 270 |||||||||||||| ||||||||||| || || || || || || ||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgccc 175 |||||||||||||||||||||||||| Sbjct: 22970458 aaatggagatgctgttggggatgccc 22970433
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 ||||||||||||||||| |||||| |||| |||||||| Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgccc 175 |||||||||||||||||||||||||| Sbjct: 22898649 aaatggagatgctgttggggatgccc 22898624
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgccc 175 |||||||||||||||||||||||||| Sbjct: 79735 aaatggagatgctgttggggatgccc 79710
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgccc 175 |||||||||||||||||||||||||| Sbjct: 2914 aaatggagatgctgttggggatgccc 2889
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 150 aaatggagatgctgttggggatgcc 174 ||||||||||||||||||||||||| Sbjct: 2772 aaatggagatgctgttggggatgcc 2748
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 aaatggagatgctgttggggatgccctt 177 |||||| ||||||||||||||||||||| Sbjct: 49249 aaatggtgatgctgttggggatgccctt 49276
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 aaatggagatgctgttggggatgccctt 177 |||||| ||||||||||||||||||||| Sbjct: 111408 aaatggtgatgctgttggggatgccctt 111435
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgcccttggcggtaagccc 189 ||||||||||||||||| |||||| |||| || ||||| Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagccc 326
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.98 Identities = 30/33 (90%) Strand = Plus / Plus Query: 208 gtcggaggtgttggggtagagcagcatgtaggg 240 |||||||||||||||| | |||||| ||||||| Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 0.98 Identities = 30/33 (90%) Strand = Plus / Plus Query: 208 gtcggaggtgttggggtagagcagcatgtaggg 240 |||||||||||||||| | |||||| ||||||| Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 0.98 Identities = 30/33 (90%) Strand = Plus / Plus Query: 208 gtcggaggtgttggggtagagcagcatgtaggg 240 |||||||||||||||| | |||||| ||||||| Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||||| ||||||||| Sbjct: 2877 atggagatgctgtttgggatgccc 2854
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gctgttggggatgcccttggcggt 183 ||||||||||||||||||| |||| Sbjct: 137475 gctgttggggatgcccttgccggt 137452
>emb|AL139396.18| Human DNA sequence from clone RP11-258C19 on chromosome Xp11.21-11.23 Contains a novel gene (KIAA0522), the SMCX gene for Smcx homolog X chromosome (mouse), an actin beta (ACTB) pseudogene, a pseudogene similar to part of suppressor of variegation 3-9 homolog 2 (SUV39H2), the 3' end of a novel gene and a CpG island, complete sequence Length = 178451 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gatggtttaaattaaatgga 156 |||||||||||||||||||| Sbjct: 165157 gatggtttaaattaaatgga 165138
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cacagacacacactacacca 82 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ttcttgagctccgggtcatg 282 |||||||||||||||||||| Sbjct: 51161 ttcttgagctccgggtcatg 51142
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gccgggccgttgcggttctt 267 |||||||||||||||||||| Sbjct: 440838 gccgggccgttgcggttctt 440857
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gctgttggggatgcccttggcggt 183 ||||||||||||||||||| |||| Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||||| ||||||||| Sbjct: 5276967 atggagatgctgtttgggatgccc 5276990
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||||| ||||||||| Sbjct: 3270 atggagatgctgtttgggatgccc 3293
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gctgttggggatgcccttggcggt 183 ||||||||||||||||||| |||| Sbjct: 2681 gctgttggggatgcccttgccggt 2658
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||||| ||||||||| Sbjct: 2876 atggagatgctgtttgggatgccc 2853
>gb|U76687.2|PVU76687 Phaseolus vulgaris lipoxygenase mRNA, complete cds Length = 3038 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ttaaatggagatgctgttggggat 171 |||||| ||||||||||||||||| Sbjct: 2871 ttaaatagagatgctgttggggat 2848
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||||| ||||||||| Sbjct: 2038 atggagatgctgtttgggatgccc 2015
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||| ||||||||||| Sbjct: 138 atggagatgctgctggggatgccc 161
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 atggagatgctgttggggatgccc 175 |||||||||||| ||||||||||| Sbjct: 1210 atggagatgctgctggggatgccc 1187
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gctgttggggatgcccttggcggt 183 ||||||||||||||||||| |||| Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cacagacacacactacacca 82 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,767,316 Number of Sequences: 3902068 Number of extensions: 2767316 Number of successful extensions: 55520 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55210 Number of HSP's gapped (non-prelim): 294 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)