>MET2_SCHPO (O60062) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase)
          Length = 489

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 129 HWRRHKNIPFDRRRKKKPCSFPGSSKS*AAVAKRPKSMASSFP 257
           HW  H     +R R+++PC   GSS +  +    P S  SS P
Sbjct: 274 HWVVHNE--GNRNRRERPCRSNGSSPTSESALNSPASSVSSLP 314

>PSTC2_MYCTU (P0A630) Phosphate transport system permease protein pstC-2|
          Length = 324

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -2

Query: 281 T*VLIIVWRKGRSHGFWSLGDGGLTLAGAWE*TRLFFSSSVKWDVFVSPPMLLFLFS 111
           T  ++++ R     G WSL DGG T A         FS  +    ++S    LF+ +
Sbjct: 251 TVAVLVILRSAARPGTWSLFDGGYTFASKIASAASEFSEPLPTGAYISAGFALFVLT 307

>PSTC2_MYCBO (P0A631) Phosphate transport system permease protein pstC-2|
          Length = 324

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -2

Query: 281 T*VLIIVWRKGRSHGFWSLGDGGLTLAGAWE*TRLFFSSSVKWDVFVSPPMLLFLFS 111
           T  ++++ R     G WSL DGG T A         FS  +    ++S    LF+ +
Sbjct: 251 TVAVLVILRSAARPGTWSLFDGGYTFASKIASAASEFSEPLPTGAYISAGFALFVLT 307

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 111  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 19
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349

>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 5   QNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 112
           +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 36  KNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69

>AFAD_HUMAN (P55196) Afadin (AF-6 protein)|
          Length = 1816

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 163  EEEKKSLVHSQAPARVRPPSPRDQNP 240
            +E  + L+  +AP   RPP PRD  P
Sbjct: 1652 DEAARRLLEPEAPGLCRPPLPRDYEP 1677

>PSTC_MYCLE (Q50098) Phosphate transport system permease protein pstC|
          Length = 319

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 281 T*VLIIVWRKGRSHGFWSLGDGGLTLAGAWE*TRLFFSSSVKWDVFVSPPMLLFLFS 111
           T  ++I+ R     G WSL DGG T A         FS  +    +++    LF  +
Sbjct: 246 TLAVLIILRSAARSGNWSLFDGGYTFASKIASAASEFSQPLPTGAYIAAGFALFFLT 302

>AF17_HUMAN (P55198) Protein AF-17|
          Length = 1093

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 136 GDTKTSHLTEEEKKSLVHSQAPARVRPPSPRDQNP 240
           GD K+ H+T     +  H + PA    P P D+ P
Sbjct: 425 GDYKSPHVTGSGASAGTHKRMPALSATPVPADETP 459

>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2|
           (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 161 VKWDVFVSPPMLLFLFSSYTI 99
           ++W VF  PPM ++L +SY I
Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,267,782
Number of Sequences: 219361
Number of extensions: 818159
Number of successful extensions: 2496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2496
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)