>S6A19_PONPY (Q5R6J1) Sodium-dependent neutral amino acid transporter B(0)|
           (System B(0) neutral amino acid transporter) (B(0)AT1)
           (Solute carrier family 6 member 19)
          Length = 634

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -2

Query: 391 LRWLFIICVAAVWTSLTIVDIKQLSTENHVVWL 293
           ++W  ++C+A  W+ L +  I+ + T   VV++
Sbjct: 193 IQWRMLLCLACAWSVLYMCTIRGIETTGKVVYI 225

>NHR77_CAEEL (O02316) Nuclear hormone receptor family member nhr-77|
          Length = 362

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 79 CGFLQYPENVIFHLRGLLIKYCASFF 2
          C   ++P NV  H  GL+   CA+FF
Sbjct: 11 CPVCEFPSNVELHFGGLVCGACAAFF 36

>NH174_CAEEL (O17748) Nuclear hormone receptor family member nhr-174|
          Length = 382

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 79  CGFLQYPENVIFHLRGLLIKYCASFF 2
           C   ++P NV  H  GL+   CA+FF
Sbjct: 65  CPVCEFPSNVELHFGGLVCGACAAFF 90

>SYNC_DEBHA (Q6BU46) Asparaginyl-tRNA synthetase, cytoplasmic (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 552

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +2

Query: 80  LASLKMRHTLDYKTLY*TLPAEEYPLIPNGCSSIYNLQTN*CNA*YCGRFSVDDCFMY 253
           +A++K R  LD  + Y      +Y   P+G    Y L T    A  C RF+V DC +Y
Sbjct: 490 VAAIK-REGLDLDSYYWFTDQRKYGTCPHGG---YGLGTERILAWLCDRFTVRDCSLY 543

>GPC6A_CARAU (Q9PW88) G-protein coupled receptor family C group 6 member A|
           precursor (Odorant receptor 5.24)
          Length = 877

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 245 NSHLQKIFHNIKHYINWSADCKLTSIHLVSKGILLLVRFSIGFY 114
           N++  K +     Y  W++   +  + L + GILLL+  S  F+
Sbjct: 546 NANSSKCYPKFYEYFEWNSGFAIALLTLAALGILLLISMSALFF 589

>LIMK1_XENLA (O42565) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (xLIMK1)|
          Length = 615

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
 Frame = +2

Query: 218 CGRFSVDDCFMYQL---WYRD---------ALAAWWRQPHNMIFCR*LFYINYGKRCPNC 361
           CG+   D C++  L   W+ D         +L+  + +    +FC+  ++  +G  C  C
Sbjct: 29  CGQSIYDGCYLQALALDWHSDCFRCSDCGVSLSHRYYEKDGRLFCKKHYWTRFGGMCQGC 88

Query: 362 SHTNDK 379
           S    K
Sbjct: 89  SENITK 94

>SYV_UREPA (Q9PQM4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 874

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 236 DDCFMYQLWYRDALAAWWRQPHNMIFC 316
           D C   QLW+   +  W+ +  N I+C
Sbjct: 404 DWCISRQLWWGHQIPVWYHKKTNQIYC 430

>UL31_HHV6U (P28865) Protein U37|
          Length = 264

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +3

Query: 201 NVMLDIVEDFL*MTVLC--INYGTGMHLQLG 287
           NV LDI+++ + +TVLC  ++  T +H+ +G
Sbjct: 204 NVYLDILQESVILTVLCETLDTNTNIHIDIG 234

>FSHP1_RAT (Q63517) Follicle-stimulating hormone primary response protein (FSH|
           primary response protein 1) (Leucine-rich primary
           response protein 1)
          Length = 745

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -1

Query: 290 STKLQVHPCT---IVDT*NSHLQKIFHNIKHYINWSADCKLTSIHLVSKGILLLVRFSIG 120
           ST+ QV P T   +  T    +  +   I+ YI W +   + +I L S   LL V F + 
Sbjct: 503 STEAQVQPMTDSPLETTLGGSMDSVSQLIE-YIGWLS---MVAIRLESSSTLL-VHFILD 557

Query: 119 FYSPACASFLN 87
           FY   C  ++N
Sbjct: 558 FYEKVCDIYIN 568

>LIM_HALRO (Q25132) LIM/homeobox protein LIM (HRLIM)|
          Length = 514

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 302 NMIFCR*LFYINYGKRCPNCSH 367
           N++FC+  F+  +G +C  C H
Sbjct: 325 NLVFCKDDFFKRFGTKCTACGH 346


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,710,975
Number of Sequences: 219361
Number of extensions: 1189517
Number of successful extensions: 2196
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)