ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl13d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_640613.1| Dictyostelium discoideum hypothetical protein (... 42 0.61
2gb|DQ353311.1| Proformica nasuta voucher RA0388 cytochrome oxida... 42 0.61
3emb|BX530069.10| Zebrafish DNA sequence from clone DKEY-22L17 in... 42 0.61
4ref|NM_100844.2| Arabidopsis thaliana unknown protein AT1G09720 ... 40 2.4
5gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility c... 40 2.4
6emb|Z79754.1|CEF25H2 Caenorhabditis elegans Cosmid F25H2, comple... 40 2.4
7gb|AC134818.1| Homo sapiens chromosome 5 clone RP11-184G11, comp... 40 2.4
8gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 2.4
9gb|AC090044.3| Homo sapiens chromosome 3 clone RP11-86C13 map 3p... 40 2.4
10gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromo... 40 2.4
11gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, comp... 40 2.4
12emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 40 2.4
13gb|AC133134.2| Homo sapiens chromosome 5 clone RP11-120B7, compl... 40 2.4
14emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chro... 40 2.4
15emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on ch... 40 2.4
16gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis tha... 40 2.4
17emb|AL807831.6| Mouse DNA sequence from clone RP23-146I17 on chr... 40 2.4
18gb|AC149382.2| Phakopsora pachyrhizi clone JGIAFNA-5A8, complete... 38 9.5
19ref|XM_640081.1| Dictyostelium discoideum hypothetical protein (... 38 9.5
20ref|NM_204394.1| Gallus gallus growth hormone secretagogue recep... 38 9.5
21gb|AC119915.12| Mus musculus chromosome 7, clone RP24-244N16, co... 38 9.5
22gb|AC107677.7| Mus musculus chromosome 3, clone RP23-235F22, com... 38 9.5
23gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 38 9.5
24gb|AC183103.2| Pan troglodytes BAC clone CH251-712L4 from chromo... 38 9.5
25gb|AY517737.1| Chaenobryttus gulosus isolate LgulB NADH dehydrog... 38 9.5
26gb|AY517736.1| Chaenobryttus gulosus isolate LgulA NADH dehydrog... 38 9.5
27gb|AE006588.1| Streptococcus pyogenes M1 GAS, section 117 of 167... 38 9.5
28gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 38 9.5
29gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 38 9.5
30gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 38 9.5
31gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 38 9.5
32gb|AC131800.4| Mus musculus BAC clone RP24-535O17 from chromosom... 38 9.5
33gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, com... 38 9.5
34gb|BC045899.1| Danio rerio hypothetical protein LOC402804, mRNA ... 38 9.5
35gb|AC116989.3| Dictyostelium discoideum chromosome 2 map 4545040... 38 9.5
36gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosom... 38 9.5
37gb|AC121567.3| Mus musculus BAC clone RP23-225D14 from 14, compl... 38 9.5
38gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 38 9.5
39emb|AL590667.7| Human DNA sequence from clone RP11-441L11 on chr... 38 9.5
40emb|AL391360.22| Human DNA sequence from clone RP13-111A12 on ch... 38 9.5
41emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 38 9.5
42emb|X94624.1|BNACS7 B.napus mRNA for acyl-CoA synthetase (2360 bp) 38 9.5
43emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 38 9.5
44emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in... 38 9.5
45gb|AC083967.5| Homo sapiens chromosome 8, clone RP11-865I6, comp... 38 9.5
46gb|AC090717.7| Homo sapiens chromosome , clone GS1-112G24, compl... 38 9.5
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
48gb|AC069257.28| Homo sapiens 3 BAC RP11-447L10 (Roswell Park Can... 38 9.5
49gb|AC012366.10| Homo sapiens BAC clone RP11-466M21 from 2, compl... 38 9.5
50gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423... 38 9.5
51gb|AC098809.3| Papio anubis clone RP41-201J11, complete sequence 38 9.5
52gb|AC098808.3| Papio anubis clone RP41-17K4, complete sequence 38 9.5
53gb|AC100798.4| Homo sapiens chromosome 8, clone RP11-600K15, com... 38 9.5
54dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
55dbj|AB095996.1| Gallus gallus Ghsr1aV mRNA for growth hormone se... 38 9.5
56dbj|AB095995.1| Gallus gallus Ghsr1a mRNA for growth hormone sec... 38 9.5
57gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q... 38 9.5
58emb|BX649576.15| Zebrafish DNA sequence from clone CH211-153M5 i... 38 9.5
59emb|BX547927.10| Zebrafish DNA sequence from clone CH211-194E15 ... 38 9.5
60emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 i... 38 9.5
61emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p1... 38 9.5
62emb|CT573099.7| Mouse DNA sequence from clone CH29-15F19 on chro... 38 9.5
63emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chro... 38 9.5
64emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in... 38 9.5
65gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, comple... 38 9.5
66emb|CT009565.10| M.truncatula DNA sequence from clone MTH2-173F9... 38 9.5
67emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chr... 38 9.5
68emb|AL670670.7| Mouse DNA sequence from clone RP23-234O7 on chro... 38 9.5 
>ref|XM_640613.1| Dictyostelium discoideum hypothetical protein (DDB0216808), partial
            mRNA
          Length = 5625

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    aatttgtccattattaattaa 29
            |||||||||||||||||||||
Sbjct: 1116 aatttgtccattattaattaa 1136
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>gb|DQ353311.1| Proformica nasuta voucher RA0388 cytochrome oxidase subunit I
          (COI) gene, partial cds; mitochondrial
          Length = 1035

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 9  aatttgtccattattaattaatgaa 33
          ||||||| |||||||||||||||||
Sbjct: 93 aatttgttcattattaattaatgaa 69
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>emb|BX530069.10| Zebrafish DNA sequence from clone DKEY-22L17 in linkage group 10,
             complete sequence
          Length = 222308

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   agttttcatcatacagttcat 145
             |||||||||||||||||||||
Sbjct: 98631 agttttcatcatacagttcat 98611
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>ref|NM_100844.2| Arabidopsis thaliana unknown protein AT1G09720 mRNA, complete cds
          Length = 2787

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   ctggaaacaacagctttgtc 82
            ||||||||||||||||||||
Sbjct: 1051 ctggaaacaacagctttgtc 1070
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>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28,
             NADH oxidoreductase, NG29, KIFC1, Fas-binding protein,
             BING1, tapasin, RalGDS-like, KE2, BING4, beta
             1,3-galactosyl transferase, and RPS18 genes, complete cds;
             Sacm21 gene, partial cds; and unknown gene
          Length = 213245

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gaaacaatagtacaaaagtc 50
             ||||||||||||||||||||
Sbjct: 99948 gaaacaatagtacaaaagtc 99929
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>emb|Z79754.1|CEF25H2 Caenorhabditis elegans Cosmid F25H2, complete sequence
          Length = 42366

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    attattaattaatgaaacaa 37
             ||||||||||||||||||||
Sbjct: 13105 attattaattaatgaaacaa 13124
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>gb|AC134818.1| Homo sapiens chromosome 5 clone RP11-184G11, complete sequence
          Length = 81872

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   taatgaaacaatagtacaaa 46
            ||||||||||||||||||||
Sbjct: 7893 taatgaaacaatagtacaaa 7874
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     attattaattaatgaaacaa 37
              ||||||||||||||||||||
Sbjct: 444649 attattaattaatgaaacaa 444668
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>gb|AC090044.3| Homo sapiens chromosome 3 clone RP11-86C13 map 3p, complete sequence
          Length = 189939

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     ttaattaatgaaacaatagt 41
              ||||||||||||||||||||
Sbjct: 129704 ttaattaatgaaacaatagt 129723
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>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete
             sequence
          Length = 179977

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttattaattaatgaaacaat 38
             ||||||||||||||||||||
Sbjct: 62930 ttattaattaatgaaacaat 62911
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>gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, complete sequence
          Length = 161248

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttattaattaatgaaacaat 38
              ||||||||||||||||||||
Sbjct: 116146 ttattaattaatgaaacaat 116127
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
             complete sequence
          Length = 209195

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tattaattaatgaaacaata 39
             ||||||||||||||||||||
Sbjct: 48060 tattaattaatgaaacaata 48041
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>gb|AC133134.2| Homo sapiens chromosome 5 clone RP11-120B7, complete sequence
          Length = 148711

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     taatgaaacaatagtacaaa 46
              ||||||||||||||||||||
Sbjct: 131432 taatgaaacaatagtacaaa 131413
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>emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chromosome 17, complete
              sequence
          Length = 220163

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaaacaatagtacaaaagtc 50
              ||||||||||||||||||||
Sbjct: 162516 gaaacaatagtacaaaagtc 162497
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>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
             sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   tttcatcatacagttcatca 147
             ||||||||||||||||||||
Sbjct: 23366 tttcatcatacagttcatca 23385
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>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 146505

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctggaaacaacagctttgtc 82
             ||||||||||||||||||||
Sbjct: 33060 ctggaaacaacagctttgtc 33041
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>emb|AL807831.6| Mouse DNA sequence from clone RP23-146I17 on chromosome X, complete
              sequence
          Length = 203118

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tattaattaatgaaacaata 39
              ||||||||||||||||||||
Sbjct: 115688 tattaattaatgaaacaata 115669
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>gb|AC149382.2| Phakopsora pachyrhizi clone JGIAFNA-5A8, complete sequence
          Length = 42167

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 115  tgataatgcaagttttcat 133
            |||||||||||||||||||
Sbjct: 5652 tgataatgcaagttttcat 5634
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>ref|XM_640081.1| Dictyostelium discoideum hypothetical protein (DDB0216975), partial
           mRNA
          Length = 2469

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 18  attattaattaatgaaacaatagtaca 44
           |||||||||||||| |||| |||||||
Sbjct: 927 attattaattaatggaacattagtaca 953
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>ref|NM_204394.1| Gallus gallus growth hormone secretagogue receptor (GHSR), mRNA
          Length = 1699

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 169  ttttgtccatatgacgtct 187
            |||||||||||||||||||
Sbjct: 1673 ttttgtccatatgacgtct 1691
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>gb|AC119915.12| Mus musculus chromosome 7, clone RP24-244N16, complete sequence
          Length = 168834

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     aatttgtccattattaattaatg 31
             |||||| ||||||||||||||||
Sbjct: 51157 aatttgaccattattaattaatg 51179
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>gb|AC107677.7| Mus musculus chromosome 3, clone RP23-235F22, complete sequence
          Length = 157746

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    atttgtccattattaatta 28
             |||||||||||||||||||
Sbjct: 54170 atttgtccattattaatta 54152
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>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1240702 ttgtcctttattaattaatgaaa 1240724
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>gb|AC183103.2| Pan troglodytes BAC clone CH251-712L4 from chromosome 3, complete
              sequence
          Length = 191366

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 11     tttgtccattattaattaatgaa 33
              |||||||||||||| ||||||||
Sbjct: 118260 tttgtccattattagttaatgaa 118238
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>gb|AY517737.1| Chaenobryttus gulosus isolate LgulB NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1047

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 79  tgtcagtcaggccttagtagtac 101
           |||||||||||| ||||||||||
Sbjct: 243 tgtcagtcaggcattagtagtac 221
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>gb|AY517736.1| Chaenobryttus gulosus isolate LgulA NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1047

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 79  tgtcagtcaggccttagtagtac 101
           |||||||||||| ||||||||||
Sbjct: 243 tgtcagtcaggcattagtagtac 221
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>gb|AE006588.1| Streptococcus pyogenes M1 GAS, section 117 of 167 of the complete
            genome
          Length = 11233

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 12   ttgtccattattaattaatgaaa 34
            |||||| ||||||||||||||||
Sbjct: 6188 ttgtcctttattaattaatgaaa 6210
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1318101 ttgtcctttattaattaatgaaa 1318123
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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1259081 ttgtcctttattaattaatgaaa 1259103
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>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1299900 ttgtcctttattaattaatgaaa 1299922
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>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1235238 ttgtcctttattaattaatgaaa 1235260
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>gb|AC131800.4| Mus musculus BAC clone RP24-535O17 from chromosome 17, complete
             sequence
          Length = 162701

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ttattaattaatgaaacaa 37
             |||||||||||||||||||
Sbjct: 98876 ttattaattaatgaaacaa 98894
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>gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, complete sequence
          Length = 208480

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 21     attaattaatgaaacaatagtacaaaa 47
              |||||||||||||| |||| |||||||
Sbjct: 156829 attaattaatgaaaaaataatacaaaa 156803
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>gb|BC045899.1| Danio rerio hypothetical protein LOC402804, mRNA (cDNA clone
            IMAGE:5410352), partial cds
          Length = 1922

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 11   tttgtccattattaattaa 29
            |||||||||||||||||||
Sbjct: 1510 tttgtccattattaattaa 1528
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>gb|AC116989.3| Dictyostelium discoideum chromosome 2 map 4545040-4559643 strain AX4,
            complete sequence
          Length = 14603

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 18   attattaattaatgaaacaatagtaca 44
            |||||||||||||| |||| |||||||
Sbjct: 3041 attattaattaatggaacattagtaca 3067
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>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence
          Length = 162530

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    ttaatgaaacaatagtaca 44
             |||||||||||||||||||
Sbjct: 65639 ttaatgaaacaatagtaca 65657
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>gb|AC121567.3| Mus musculus BAC clone RP23-225D14 from 14, complete sequence
          Length = 165586

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tattaattaatgaaacaat 38
             |||||||||||||||||||
Sbjct: 39405 tattaattaatgaaacaat 39423
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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 12      ttgtccattattaattaatgaaa 34
               |||||| ||||||||||||||||
Sbjct: 1272669 ttgtcctttattaattaatgaaa 1272691
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>emb|AL590667.7| Human DNA sequence from clone RP11-441L11 on chromosome 1 Contains a
              novel transcript and the 5' end of the BCL9 gene for B-cell
              CLL/lymphoma 9 protein, complete sequence
          Length = 175494

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     tttgtcagtcaggccttag 95
              |||||||||||||||||||
Sbjct: 165684 tttgtcagtcaggccttag 165702
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>emb|AL391360.22| Human DNA sequence from clone RP13-111A12 on chromosome Xq27.1-28,
             complete sequence
          Length = 71739

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   catacagttcatcaacaca 152
             |||||||||||||||||||
Sbjct: 57540 catacagttcatcaacaca 57558
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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    tcccagcacagccgctggaaaca 71
             ||||||||||||| |||||||||
Sbjct: 45049 tcccagcacagcctctggaaaca 45071
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>emb|X94624.1|BNACS7 B.napus mRNA for acyl-CoA synthetase (2360 bp)
          Length = 2360

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   acaaaagtcccagcacagc 60
            |||||||||||||||||||
Sbjct: 1364 acaaaagtcccagcacagc 1346
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>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
             complete sequence
          Length = 137898

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    tttgtccattattaattaa 29
             |||||||||||||||||||
Sbjct: 35113 tttgtccattattaattaa 35131
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>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
             complete sequence
          Length = 209735

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    atagtacaaaagtcccagc 55
             |||||||||||||||||||
Sbjct: 51933 atagtacaaaagtcccagc 51915
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>gb|AC083967.5| Homo sapiens chromosome 8, clone RP11-865I6, complete sequence
          Length = 170241

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    tccattattaattaatgaa 33
             |||||||||||||||||||
Sbjct: 45353 tccattattaattaatgaa 45335
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>gb|AC090717.7| Homo sapiens chromosome , clone GS1-112G24, complete sequence
          Length = 123022

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    tccattattaattaatgaa 33
             |||||||||||||||||||
Sbjct: 65360 tccattattaattaatgaa 65378
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 105      attaattagctgataatgc 123
                |||||||||||||||||||
Sbjct: 29206857 attaattagctgataatgc 29206839
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>gb|AC069257.28| Homo sapiens 3 BAC RP11-447L10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188969

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    tattaattaatgaaacaat 38
             |||||||||||||||||||
Sbjct: 15518 tattaattaatgaaacaat 15500
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>gb|AC012366.10| Homo sapiens BAC clone RP11-466M21 from 2, complete sequence
          Length = 197775

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   aatgcaagttttcatcata 137
             |||||||||||||||||||
Sbjct: 20721 aatgcaagttttcatcata 20703
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>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4,
              complete sequence
          Length = 266544

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     attattaattaatgaaaca 36
              |||||||||||||||||||
Sbjct: 265780 attattaattaatgaaaca 265762
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>gb|AC098809.3| Papio anubis clone RP41-201J11, complete sequence
          Length = 74237

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 3    aacaacaatttgtccattattaa 25
            |||||||||||||| ||||||||
Sbjct: 7285 aacaacaatttgtcaattattaa 7307
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>gb|AC098808.3| Papio anubis clone RP41-17K4, complete sequence
          Length = 157557

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      aacaacaatttgtccattattaa 25
              |||||||||||||| ||||||||
Sbjct: 137437 aacaacaatttgtcaattattaa 137459
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>gb|AC100798.4| Homo sapiens chromosome 8, clone RP11-600K15, complete sequence
          Length = 167799

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     tccattattaattaatgaa 33
              |||||||||||||||||||
Sbjct: 126596 tccattattaattaatgaa 126578
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>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1165_F02
          Length = 125993

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   attaattagctgataatgc 123
             |||||||||||||||||||
Sbjct: 46931 attaattagctgataatgc 46913
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>dbj|AB095996.1| Gallus gallus Ghsr1aV mRNA for growth hormone secretagogue receptor
            type 1a variant, complete cds
          Length = 1703

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 169  ttttgtccatatgacgtct 187
            |||||||||||||||||||
Sbjct: 1625 ttttgtccatatgacgtct 1643
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>dbj|AB095995.1| Gallus gallus Ghsr1a mRNA for growth hormone secretagogue receptor
            type 1a, complete cds
          Length = 1751

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 169  ttttgtccatatgacgtct 187
            |||||||||||||||||||
Sbjct: 1673 ttttgtccatatgacgtct 1691
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>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence
          Length = 226916

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    aattaatgaaacaatagta 42
             |||||||||||||||||||
Sbjct: 80404 aattaatgaaacaatagta 80386
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>emb|BX649576.15| Zebrafish DNA sequence from clone CH211-153M5 in linkage group 18,
             complete sequence
          Length = 108124

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   agattaattagctgataat 121
             |||||||||||||||||||
Sbjct: 99193 agattaattagctgataat 99211
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>emb|BX547927.10| Zebrafish DNA sequence from clone CH211-194E15 in linkage group 19,
             complete sequence
          Length = 215498

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tgcaagttttcatcatacagttc 143
             |||||||||||| ||||||||||
Sbjct: 50573 tgcaagttttcaccatacagttc 50595
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>emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 in linkage group 24,
             complete sequence
          Length = 164521

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    atagtacaaaagtcccagc 55
             |||||||||||||||||||
Sbjct: 77226 atagtacaaaagtcccagc 77208
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>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE
          Length = 109575

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    attaattaatgaaacaatagtac 43
             ||||||||||| |||||||||||
Sbjct: 95825 attaattaatgcaacaatagtac 95847
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>emb|CT573099.7| Mouse DNA sequence from clone CH29-15F19 on chromosome 17, complete
             sequence
          Length = 82473

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ttattaattaatgaaacaa 37
             |||||||||||||||||||
Sbjct: 20896 ttattaattaatgaaacaa 20914
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>emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chromosome X, complete
             sequence
          Length = 102565

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     acaatttgtccattattaa 25
             |||||||||||||||||||
Sbjct: 63556 acaatttgtccattattaa 63538
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>emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in linkage group 7,
             complete sequence
          Length = 205682

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ccattattaattaatgaaa 34
             |||||||||||||||||||
Sbjct: 31063 ccattattaattaatgaaa 31081
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>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence
          Length = 195652

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     caaaagtcccagcacagcc 61
              |||||||||||||||||||
Sbjct: 150529 caaaagtcccagcacagcc 150547
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>emb|CT009565.10| M.truncatula DNA sequence from clone MTH2-173F9 on chromosome 3,
             complete sequence
          Length = 151325

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     caacaatttgtccattatt 23
             |||||||||||||||||||
Sbjct: 28490 caacaatttgtccattatt 28472
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>emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chromosome 4, complete
             sequence
          Length = 190214

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 63    ctggaaacaacagctttgtcagt 85
             |||||||||||||||| ||||||
Sbjct: 52559 ctggaaacaacagcttcgtcagt 52581
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>emb|AL670670.7| Mouse DNA sequence from clone RP23-234O7 on chromosome X, complete
             sequence
          Length = 91811

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 68    aacaacagctttgtcagtcaggc 90
             |||||||||||||| ||||||||
Sbjct: 17277 aacaacagctttgtaagtcaggc 17299


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,130,447
Number of Sequences: 3902068
Number of extensions: 2130447
Number of successful extensions: 151856
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151495
Number of HSP's gapped (non-prelim): 361
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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