ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl13d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 323 2e-85
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 163 5e-37
3gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 90 6e-15
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 9e-14
5emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 86 9e-14
6gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 86 9e-14
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
8dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
9ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 84 3e-13
10gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 80 5e-12
11gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 78 2e-11
12gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 76 8e-11
13gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 70 5e-09
14gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 68 2e-08
15gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 68 2e-08
16gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 68 2e-08
17gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 68 2e-08
18gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 68 2e-08
19gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 68 2e-08
20gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 68 2e-08
21gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 68 2e-08
22gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 68 2e-08
23gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 68 2e-08
24gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 68 2e-08
25gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 68 2e-08
26gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 68 2e-08
27gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 68 2e-08
28gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 68 2e-08
29gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 68 2e-08
30gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 68 2e-08
31ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
32ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
33ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
34gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 60 5e-06
35gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 60 5e-06
36gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 60 5e-06
37dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
38dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
39dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
40dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
41gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 58 2e-05
42gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 54 3e-04
43ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.075
44gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.075
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
47dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
48dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
49dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.075
50gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 46 0.075
51gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 46 0.075
52dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 46 0.075
53ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
55dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
56dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
57dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
58gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 44 0.30
59gb|AY103567.1| Zea mays PCO116252 mRNA sequence 44 0.30
60emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 1.2
61emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 1.2 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  323 bits (163), Expect = 2e-85
 Identities = 172/175 (98%)
 Strand = Plus / Minus

                                                                        
Query: 177  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 236
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 237  gtgctcaaatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 296
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                                                   
Query: 297  tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 2553



 Score =  250 bits (126), Expect = 3e-63
 Identities = 142/147 (96%), Gaps = 4/147 (2%)
 Strand = Plus / Minus

                                                                        
Query: 12   ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 71
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 72   agctgagctgagcttccgcatgccgatcagacccgtcgggcacgcaccc----ttattgc 127
            |||||||||||||||||||||||||||||||||||||| ||||||||||    |||||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                       
Query: 128  cttaattattcatgcaccggcacaact 154
            |||||||||||||||||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaact 2750
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  163 bits (82), Expect = 5e-37
 Identities = 100/106 (94%)
 Strand = Plus / Minus

                                                                       
Query: 246 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
           ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 906 tcagatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtg 847

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 846 gtcggaggtgttggggtagagcagcatgtaggggaacttggccggc 801



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 5    catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 54
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 41/46 (89%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 87   ccgcatgccgatcagacccgtcgggcacgcac-ccttattgcctta 131
            ||||||||||||| ||||||||| |||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 246 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
           ||||||||| |||||||| ||||||||| | |||||||||||  ||||    ||| ||||
Sbjct: 753 tcagatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtg 694

                                                        
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccgg 350
            ||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 693 atcggaggtgttggggtagagcaacatgtaggggaacttggccgg 649
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                            
Query: 245      atcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgt 304
                |||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || 
Sbjct: 30026450 atcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttga 30026391

                                                               
Query: 305      ggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
                |||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 30026390 ggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 30026344



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 246      tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27821686 tcagatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 306      gtcggaggtgtttgggtagagcagcatgtatgggaact 343
                |||||||||||| ||||| |||||||||||||||||||
Sbjct: 27803047 gtcggaggtgttggggtaaagcagcatgtatgggaact 27803010
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgt 304
            |||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || 
Sbjct: 2696 atcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttga 2637

                                                           
Query: 305  ggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
            |||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 2636 ggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 2590
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 245   atcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgt 304
             |||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || 
Sbjct: 81301 atcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttga 81360

                                                            
Query: 305   ggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
             |||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 81361 ggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 81407
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                            
Query: 245      atcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgt 304
                |||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || 
Sbjct: 30117872 atcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttga 30117813

                                                               
Query: 305      ggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
                |||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 30117812 ggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 30117766



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 246      tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27913010 tcagatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 306      gtcggaggtgtttgggtagagcagcatgtatgggaact 343
                |||||||||||| ||||| |||||||||||||||||||
Sbjct: 27894371 gtcggaggtgttggggtaaagcagcatgtatgggaact 27894334
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgt 304
            |||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || 
Sbjct: 2729 atcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttga 2670

                                                           
Query: 305  ggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
            |||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 2669 ggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 2623
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
            ||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || |
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgag 2554

                                                          
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
            ||||||||||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 2553 gtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggc 2508
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  aaatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 302
            |||| ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| |
Sbjct: 1089 aaattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 1030

                                                            
Query: 303  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccgg 350
            ||||||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 1029 gtggtcggaggtgttggggtagagcagcatgtagggaaacttagccgg 982
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 87/103 (84%)
 Strand = Plus / Minus

                                                                        
Query: 248  agatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggt 307
            ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| ||||||
Sbjct: 2655 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 2596

                                                       
Query: 308  cggaggtgtttgggtagagcagcatgtatgggaacttggccgg 350
            |||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 2595 cggaggtgttggggtagagcagcatgtagggaaacttagccgg 2553
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                        
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2064 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2005

                                                  
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaact 343
            ||| |||||||| ||||||||||||||||| |||||||
Sbjct: 2004 gtcagaggtgttggggtagagcagcatgtaggggaact 1967
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>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 atgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcggaggtg 315
           |||||||| ||||||||| |||||||||| ||  ||||    ||| |||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                                              
Query: 316 tttgggtagagcagcatgtatgggaacttggccgg 350
           || ||||||||||||||||| |||| |||||||||
Sbjct: 61  ttagggtagagcagcatgtaggggagcttggccgg 95
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>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 736 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 691
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>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
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>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
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>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
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>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
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>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 306 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggc 351
           |||||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggc 686
to top
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 4662 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 4603

                                                  
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaact 343
            ||| |||||||| || |||||||||||||| |||||||
Sbjct: 4602 gtcagaggtgttgggatagagcagcatgtaggggaact 4565
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 305
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2595 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2536

                                                  
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaact 343
            ||| |||||||| || |||||||||||||| |||||||
Sbjct: 2535 gtcagaggtgttgggatagagcagcatgtaggggaact 2498
to top
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2446 tcagatggagatgctgttggggatgcccatggcggtgagccc 2405
to top
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2925 tcagatggagatgctgttggggatgcccatggcggtgagccc 2884
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaact 343
            |||||||||||| ||||| |||||||||||||||||||
Sbjct: 2541 gtcggaggtgttggggtaaagcagcatgtatgggaact 2504
to top
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 246   tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
             ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 65816 tcagatggagatgctgttggggatgcccatggcggtgagccc 65775



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 306   gtcggaggtgtttgggtagagcagcatgtatgggaact 343
             |||||||||||| ||||| |||||||||||||||||||
Sbjct: 47177 gtcggaggtgttggggtaaagcagcatgtatgggaact 47140
to top
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2919 tcagatggagatgctgttggggatgcccatggcggtgagccc 2878
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 306   gtcggaggtgtttgggtagagcagcatgtatgggaact 343
             |||||||||||| ||||| |||||||||||||||||||
Sbjct: 10846 gtcggaggtgttggggtaaagcagcatgtatgggaact 10883
to top
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1332 tcagatggagatgctgttggggatgcccatggcggtgagccc 1291
to top
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2597 tcagatggagatgctgttggggatgcccatggcggtgagccc 2556
to top
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2927 tcagatggagatgctgttggggatgcccatggcggtgagccc 2886
to top
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagccc 287
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1497 tcagatggagatgctgttggggatgcccatggcggtgagccc 1456
to top
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 306  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccgg 350
            |||||||||||| |||||||||||| |||| ||||||| ||||||
Sbjct: 2562 gtcggaggtgttggggtagagcagcgtgtaggggaactcggccgg 2518
to top
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 246  tcagatggatatgctgttcgggatgcccctggcggtgagcccc 288
            ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2764 tcagatggagacgctgttggggatgcccatggcggtgagcccc 2722
to top
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtga 283
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2978 atcagatggatgtgctgttggggatgcccatgccggtga 2940
to top
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 119    ccttattgccttaattattcatg 141
              |||||||||||||||||||||||
Sbjct: 136193 ccttattgccttaattattcatg 136215



 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 119   ccttattgccttaattattcatg 141
             |||||||||||||||||||||||
Sbjct: 94214 ccttattgccttaattattcatg 94236
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 245      atcagatggatatgctgttcgggatgcccctggcggtga 283
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25242576 atcagatggatgtgctgttggggatgcccatgccggtga 25242538



 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 245      atcagatggatatgctgttcgggatgcccctggcggtga 283
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25209453 atcagatggatgtgctgttggggatgcccatgccggtga 25209491
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 119      ccttattgccttaattattcatg 141
                |||||||||||||||||||||||
Sbjct: 21745017 ccttattgccttaattattcatg 21745039



 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 119      ccttattgccttaattattcatg 141
                |||||||||||||||||||||||
Sbjct: 21703038 ccttattgccttaattattcatg 21703060
to top
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 245    atcagatggatatgctgttcgggatgcccctggcggtga 283
              ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 107699 atcagatggatgtgctgttggggatgcccatgccggtga 107661



 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 245   atcagatggatatgctgttcgggatgcccctggcggtga 283
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 74576 atcagatggatgtgctgttggggatgcccatgccggtga 74614
to top
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 245   atcagatggatatgctgttcgggatgcccctggcggtga 283
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 17761 atcagatggatgtgctgttggggatgcccatgccggtga 17723
to top
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtga 283
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2976 atcagatggatgtgctgttggggatgcccatgccggtga 2938
to top
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtga 283
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2053 atcagatggatgtgctgttggggatgcccatgccggtga 2015
to top
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtga 283
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2461 atcagatggatgtgctgttggggatgcccatgccggtga 2423
to top
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 245  atcagatggatatgctgttcgggatgcccctggcggtga 283
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2891 atcagatggatgtgctgttggggatgcccatgccggtga 2853
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 246  tcagatggatatgctgttcgggatgcccct 275
            ||||||||| |||||||| |||||||||||
Sbjct: 2881 tcagatggagatgctgtttgggatgcccct 2852
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 246     tcagatggatatgctgttcgggatgcccct 275
               ||||||||| |||||||| |||||||||||
Sbjct: 5276963 tcagatggagatgctgtttgggatgcccct 5276992
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 246  tcagatggatatgctgttcgggatgcccct 275
            ||||||||| |||||||| |||||||||||
Sbjct: 3266 tcagatggagatgctgtttgggatgcccct 3295
to top
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 246  tcagatggatatgctgttcgggatgcccct 275
            ||||||||| |||||||| |||||||||||
Sbjct: 2880 tcagatggagatgctgtttgggatgcccct 2851
to top
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 246  tcagatggatatgctgttcgggatgcccct 275
            ||||||||| |||||||| |||||||||||
Sbjct: 2042 tcagatggagatgctgtttgggatgcccct 2013
to top
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 250 atggatatgctgttcgggatgcccctggcggtgagcccctcg 291
           ||||| |||||||| || |||||| |||| ||||||||||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagcccctcg 322
to top
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 250  atggatatgctgttcgggatgcccctggcggtgagcccctcggcct 295
            ||||| |||||||| || |||||| |||| || |||||||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagcccctcggcct 2851
to top
>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    aaacaagggattttttctgca 46
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585
to top
>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    gcaaaacaagggattttttct 43
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,080,004
Number of Sequences: 3902068
Number of extensions: 2080004
Number of successful extensions: 39009
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38814
Number of HSP's gapped (non-prelim): 193
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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